Re: Bug#415418: components of phylip give wrong tree files
Le Mon, Mar 19, 2007 at 02:07:52PM +0100, Andreas Tille a écrit :
> On Mon, 19 Mar 2007, Elo Peter wrote:
>
> >Various programs in the phylip package (proml, fitch) describe wrong
> >phylogenetic trees. The problem should be in the common parts which
> >outputs the "outtree" files. Since for example the distance matrix file
> >produced by protdist is correct, but fitch -using this orrect matrix -
> >describes the same nonsense tree like proml from the same alignment.
Dear Peter,
we need to reproduce your bug to solve it. If the data which triggers it
is unpublished, do not hesitate to sent it to me in private with
instructions on how to reproduce the bug. Also, we need to make it clear
if the problem you reported is specific to Debian, or if it affects
phylip in general. In that case, it would be necessary to address it with
the upstream maintainer, which still works on phylip.
http://evolution.genetics.washington.edu/phylip/versions.html
Have a nice day,
--
Charles Plessy
Debian-Med packaging team.
Wako, Saitama, Japan
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