Re: [Debian-med-packaging] sibsim4_0.14-1_i386.changes is NEW

[Charles Plessy <charles-listes-med-packaging@plessy.org>]

Le Wed, Jan 10, 2007 at 06:17:02AM +0000, Debian Installer a écrit :
> (new) sibsim4_0.14-1.diff.gz optional science
> (new) sibsim4_0.14-1.dsc optional science
> (new) sibsim4_0.14-1_i386.deb optional science
> align expressed RNA sequences on a DNA template
                  ^^^

>  The SIBsim4 project is based on sim4, which is a program designed to align
>  an expressed DNA sequence with a genomic sequence, allowing for introns.
                ^^^

Nelson, you unfortunately have a typo in your description :( Anyway, it
may be better to not distinguish DNA and RNA as the RNA sequences are
obtained from cDNA and therefore traditionally stored with T instead of
U in the databases... (which makes the small description true in theory
and the long one true in practice.)

By the way, is sim4 dead upstream ?

Have a nice day,

-- 
Charles
http://charles.plessy.org
Wako, Saitama, Japan