Bug#887008: linux-image-4.9.0-5-amd64: Virtualbox time sync gone haywire after host kernel upgraded from 4.9.0-4-amd64 to 4.9.0-5-amd64
Package: src:linux
Version: 4.9.65-3+deb9u2
Severity: normal
Dear Maintainer,
* What led up to the situation?
After upgrading the kernel from 4.9.0-4-amd64 to 4.9.0-5-amd64, the
the clocks of the two virtualbox guests started to run considrably
slower then normal, loosing serveral minutes per day.
One of the virtual machines is running Ubuntu 12.04.5, with kernel
3.2.0-126-generic-pae, the other Debian 9.3, with kernel 4.9.0-4-amd64
or 4.9.0-5-amd64 (tried both, no difference).
Downgrading the host kernel to 4.9.0-4-amd64 eliminated the problem.
I have the following virtualbox packages installed:
virtualbox 5.1.30-dfsg-1~bpo9+1
virtualbox-dkms 5.1.30-dfsg-1~bpo9+1
-- Package-specific info:
** Kernel log: boot messages should be attached
** Model information
bios_vendor: American Megatrends Inc.
bios_version: P1.40
board_vendor: ASRock
board_name: B85M Pro3
** PCI devices:
00:00.0 Host bridge [0600]: Intel Corporation 4th Gen Core Processor DRAM Controller [8086:0c00] (rev 06)
Subsystem: ASRock Incorporation 4th Gen Core Processor DRAM Controller [1849:0c00]
Control: I/O- Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop- ParErr- Stepping- SERR- FastB2B- DisINTx-
Status: Cap+ 66MHz- UDF- FastB2B+ ParErr- DEVSEL=fast >TAbort- <TAbort- <MAbort+ >SERR- <PERR- INTx-
Latency: 0
Capabilities: <access denied>
Kernel driver in use: hsw_uncore
00:01.0 PCI bridge [0604]: Intel Corporation Xeon E3-1200 v3/4th Gen Core Processor PCI Express x16 Controller [8086:0c01] (rev 06) (prog-if 00 [Normal decode])
Control: I/O+ Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop- ParErr- Stepping- SERR- FastB2B- DisINTx+
Status: Cap+ 66MHz- UDF- FastB2B- ParErr- DEVSEL=fast >TAbort- <TAbort- <MAbort- >SERR- <PERR- INTx-
Latency: 0, Cache Line Size: 64 bytes
Interrupt: pin A routed to IRQ 24
Bus: primary=00, secondary=01, subordinate=01, sec-latency=0
I/O behind bridge: 0000e000-0000efff
Memory behind bridge: f0500000-f05fffff
Secondary status: 66MHz- FastB2B- ParErr- DEVSEL=fast >TAbort- <TAbort- <MAbort+ <SERR- <PERR-
BridgeCtl: Parity- SERR- NoISA- VGA- MAbort- >Reset- FastB2B-
PriDiscTmr- SecDiscTmr- DiscTmrStat- DiscTmrSERREn-
Capabilities: <access denied>
Kernel driver in use: pcieport
Kernel modules: shpchp
00:02.0 VGA compatible controller [0300]: Intel Corporation Xeon E3-1200 v3/4th Gen Core Processor Integrated Graphics Controller [8086:0402] (rev 06) (prog-if 00 [VGA controller])
Subsystem: ASRock Incorporation Xeon E3-1200 v3/4th Gen Core Processor Integrated Graphics Controller [1849:0402]
Control: I/O+ Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop- ParErr- Stepping- SERR- FastB2B- DisINTx+
Status: Cap+ 66MHz- UDF- FastB2B+ ParErr- DEVSEL=fast >TAbort- <TAbort- <MAbort- >SERR- <PERR- INTx-
Latency: 0
Interrupt: pin A routed to IRQ 31
Region 0: Memory at f0000000 (64-bit, non-prefetchable) [size=4M]
Region 2: Memory at e0000000 (64-bit, prefetchable) [size=256M]
Region 4: I/O ports at f000 [size=64]
[virtual] Expansion ROM at 000c0000 [disabled] [size=128K]
Capabilities: <access denied>
Kernel driver in use: i915
Kernel modules: i915
00:03.0 Audio device [0403]: Intel Corporation Xeon E3-1200 v3/4th Gen Core Processor HD Audio Controller [8086:0c0c] (rev 06)
Subsystem: ASRock Incorporation Xeon E3-1200 v3/4th Gen Core Processor HD Audio Controller [1849:0c0c]
Control: I/O- Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop- ParErr- Stepping- SERR- FastB2B- DisINTx+
Status: Cap+ 66MHz- UDF- FastB2B- ParErr- DEVSEL=fast >TAbort- <TAbort- <MAbort- >SERR- <PERR- INTx-
Latency: 0, Cache Line Size: 64 bytes
Interrupt: pin A routed to IRQ 32
Region 0: Memory at f0614000 (64-bit, non-prefetchable) [size=16K]
Capabilities: <access denied>
Kernel driver in use: snd_hda_intel
Kernel modules: snd_hda_intel
00:14.0 USB controller [0c03]: Intel Corporation 8 Series/C220 Series Chipset Family USB xHCI [8086:8c31] (rev 05) (prog-if 30 [XHCI])
Subsystem: ASRock Incorporation 8 Series/C220 Series Chipset Family USB xHCI [1849:8c31]
Control: I/O- Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop- ParErr- Stepping- SERR- FastB2B- DisINTx+
Status: Cap+ 66MHz- UDF- FastB2B+ ParErr- DEVSEL=medium >TAbort- <TAbort- <MAbort- >SERR- <PERR- INTx-
Latency: 0
Interrupt: pin A routed to IRQ 26
Region 0: Memory at f0600000 (64-bit, non-prefetchable) [size=64K]
Capabilities: <access denied>
Kernel driver in use: xhci_hcd
Kernel modules: xhci_pci
00:16.0 Communication controller [0780]: Intel Corporation 8 Series/C220 Series Chipset Family MEI Controller #1 [8086:8c3a] (rev 04)
Subsystem: ASRock Incorporation 8 Series/C220 Series Chipset Family MEI Controller [1849:8c3a]
Control: I/O- Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop- ParErr- Stepping- SERR- FastB2B- DisINTx+
Status: Cap+ 66MHz- UDF- FastB2B- ParErr- DEVSEL=fast >TAbort- <TAbort- <MAbort- >SERR- <PERR- INTx-
Latency: 0
Interrupt: pin A routed to IRQ 29
Region 0: Memory at f061e000 (64-bit, non-prefetchable) [size=16]
Capabilities: <access denied>
Kernel driver in use: mei_me
Kernel modules: mei_me
00:1a.0 USB controller [0c03]: Intel Corporation 8 Series/C220 Series Chipset Family USB EHCI #2 [8086:8c2d] (rev 05) (prog-if 20 [EHCI])
Subsystem: ASRock Incorporation 8 Series/C220 Series Chipset Family USB EHCI [1849:8c2d]
Control: I/O- Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop- ParErr- Stepping- SERR- FastB2B- DisINTx-
Status: Cap+ 66MHz- UDF- FastB2B+ ParErr- DEVSEL=medium >TAbort- <TAbort- <MAbort- >SERR- <PERR- INTx-
Latency: 0
Interrupt: pin A routed to IRQ 16
Region 0: Memory at f061c000 (32-bit, non-prefetchable) [size=1K]
Capabilities: <access denied>
Kernel driver in use: ehci-pci
Kernel modules: ehci_pci
00:1b.0 Audio device [0403]: Intel Corporation 8 Series/C220 Series Chipset High Definition Audio Controller [8086:8c20] (rev 05)
Subsystem: ASRock Incorporation 8 Series/C220 Series Chipset High Definition Audio Controller [1849:7662]
Control: I/O- Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop- ParErr- Stepping- SERR- FastB2B- DisINTx+
Status: Cap+ 66MHz- UDF- FastB2B- ParErr- DEVSEL=fast >TAbort- <TAbort- <MAbort- >SERR- <PERR- INTx-
Latency: 0, Cache Line Size: 64 bytes
Interrupt: pin A routed to IRQ 30
Region 0: Memory at f0610000 (64-bit, non-prefetchable) [size=16K]
Capabilities: <access denied>
Kernel driver in use: snd_hda_intel
Kernel modules: snd_hda_intel
00:1c.0 PCI bridge [0604]: Intel Corporation 8 Series/C220 Series Chipset Family PCI Express Root Port #1 [8086:8c10] (rev d5) (prog-if 00 [Normal decode])
Control: I/O+ Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop- ParErr- Stepping- SERR- FastB2B- DisINTx-
Status: Cap+ 66MHz- UDF- FastB2B- ParErr- DEVSEL=fast >TAbort- <TAbort- <MAbort- >SERR- <PERR- INTx-
Latency: 0, Cache Line Size: 64 bytes
Interrupt: pin A routed to IRQ 16
Bus: primary=00, secondary=02, subordinate=02, sec-latency=0
I/O behind bridge: 00002000-00002fff
Memory behind bridge: dfa00000-dfbfffff
Prefetchable memory behind bridge: 00000000dfc00000-00000000dfdfffff
Secondary status: 66MHz- FastB2B- ParErr- DEVSEL=fast >TAbort- <TAbort- <MAbort+ <SERR- <PERR-
BridgeCtl: Parity- SERR- NoISA- VGA- MAbort- >Reset- FastB2B-
PriDiscTmr- SecDiscTmr- DiscTmrStat- DiscTmrSERREn-
Capabilities: <access denied>
Kernel driver in use: pcieport
Kernel modules: shpchp
00:1c.3 PCI bridge [0604]: Intel Corporation 8 Series/C220 Series Chipset Family PCI Express Root Port #4 [8086:8c16] (rev d5) (prog-if 00 [Normal decode])
Control: I/O+ Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop- ParErr- Stepping- SERR- FastB2B- DisINTx-
Status: Cap+ 66MHz- UDF- FastB2B- ParErr- DEVSEL=fast >TAbort- <TAbort- <MAbort- >SERR- <PERR- INTx-
Latency: 0, Cache Line Size: 64 bytes
Interrupt: pin D routed to IRQ 19
Bus: primary=00, secondary=03, subordinate=03, sec-latency=0
I/O behind bridge: 0000d000-0000dfff
Memory behind bridge: f0400000-f04fffff
Secondary status: 66MHz- FastB2B- ParErr- DEVSEL=fast >TAbort- <TAbort- <MAbort- <SERR- <PERR-
BridgeCtl: Parity- SERR- NoISA- VGA- MAbort- >Reset- FastB2B-
PriDiscTmr- SecDiscTmr- DiscTmrStat- DiscTmrSERREn-
Capabilities: <access denied>
Kernel driver in use: pcieport
Kernel modules: shpchp
00:1d.0 USB controller [0c03]: Intel Corporation 8 Series/C220 Series Chipset Family USB EHCI #1 [8086:8c26] (rev 05) (prog-if 20 [EHCI])
Subsystem: ASRock Incorporation 8 Series/C220 Series Chipset Family USB EHCI [1849:8c26]
Control: I/O- Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop- ParErr- Stepping- SERR- FastB2B- DisINTx-
Status: Cap+ 66MHz- UDF- FastB2B+ ParErr- DEVSEL=medium >TAbort- <TAbort- <MAbort- >SERR- <PERR- INTx-
Latency: 0
Interrupt: pin A routed to IRQ 23
Region 0: Memory at f061b000 (32-bit, non-prefetchable) [size=1K]
Capabilities: <access denied>
Kernel driver in use: ehci-pci
Kernel modules: ehci_pci
00:1f.0 ISA bridge [0601]: Intel Corporation B85 Express LPC Controller [8086:8c50] (rev 05)
Subsystem: ASRock Incorporation B85 Express LPC Controller [1849:8c50]
Control: I/O+ Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop- ParErr- Stepping- SERR- FastB2B- DisINTx-
Status: Cap+ 66MHz- UDF- FastB2B- ParErr- DEVSEL=medium >TAbort- <TAbort- <MAbort- >SERR- <PERR- INTx-
Latency: 0
Capabilities: <access denied>
Kernel driver in use: lpc_ich
Kernel modules: lpc_ich
00:1f.2 SATA controller [0106]: Intel Corporation 8 Series/C220 Series Chipset Family 6-port SATA Controller 1 [AHCI mode] [8086:8c02] (rev 05) (prog-if 01 [AHCI 1.0])
Subsystem: ASRock Incorporation 8 Series/C220 Series Chipset Family 6-port SATA Controller 1 [AHCI mode] [1849:8c02]
Control: I/O+ Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop- ParErr- Stepping- SERR- FastB2B- DisINTx+
Status: Cap+ 66MHz+ UDF- FastB2B+ ParErr- DEVSEL=medium >TAbort- <TAbort- <MAbort- >SERR- <PERR- INTx-
Latency: 0
Interrupt: pin B routed to IRQ 28
Region 0: I/O ports at f0b0 [size=8]
Region 1: I/O ports at f0a0 [size=4]
Region 2: I/O ports at f090 [size=8]
Region 3: I/O ports at f080 [size=4]
Region 4: I/O ports at f060 [size=32]
Region 5: Memory at f061a000 (32-bit, non-prefetchable) [size=2K]
Capabilities: <access denied>
Kernel driver in use: ahci
Kernel modules: ahci
00:1f.3 SMBus [0c05]: Intel Corporation 8 Series/C220 Series Chipset Family SMBus Controller [8086:8c22] (rev 05)
Subsystem: ASRock Incorporation 8 Series/C220 Series Chipset Family SMBus Controller [1849:8c22]
Control: I/O+ Mem+ BusMaster- SpecCycle- MemWINV- VGASnoop- ParErr- Stepping- SERR- FastB2B- DisINTx-
Status: Cap- 66MHz- UDF- FastB2B+ ParErr- DEVSEL=medium >TAbort- <TAbort- <MAbort- >SERR- <PERR- INTx-
Interrupt: pin C routed to IRQ 18
Region 0: Memory at f0619000 (64-bit, non-prefetchable) [size=256]
Region 4: I/O ports at f040 [size=32]
Kernel driver in use: i801_smbus
Kernel modules: i2c_i801
01:00.0 Ethernet controller [0200]: Realtek Semiconductor Co., Ltd. RTL8111/8168/8411 PCI Express Gigabit Ethernet Controller [10ec:8168] (rev 06)
Subsystem: TP-LINK Technologies Co., Ltd. TG-3468 Gigabit PCI Express Network Adapter [7470:3468]
Control: I/O+ Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop- ParErr- Stepping- SERR- FastB2B- DisINTx+
Status: Cap+ 66MHz- UDF- FastB2B- ParErr- DEVSEL=fast >TAbort- <TAbort- <MAbort- >SERR- <PERR- INTx-
Latency: 0, Cache Line Size: 64 bytes
Interrupt: pin A routed to IRQ 25
Region 0: I/O ports at e000 [size=256]
Region 2: Memory at f0504000 (64-bit, non-prefetchable) [size=4K]
Region 4: Memory at f0500000 (64-bit, prefetchable) [size=16K]
Capabilities: <access denied>
Kernel driver in use: r8169
Kernel modules: r8169
03:00.0 Ethernet controller [0200]: Realtek Semiconductor Co., Ltd. RTL8111/8168/8411 PCI Express Gigabit Ethernet Controller [10ec:8168] (rev 11)
Subsystem: ASRock Incorporation Motherboard (one of many) [1849:8168]
Control: I/O+ Mem+ BusMaster+ SpecCycle- MemWINV- VGASnoop- ParErr- Stepping- SERR- FastB2B- DisINTx+
Status: Cap+ 66MHz- UDF- FastB2B- ParErr- DEVSEL=fast >TAbort- <TAbort- <MAbort- >SERR- <PERR- INTx-
Latency: 0, Cache Line Size: 64 bytes
Interrupt: pin A routed to IRQ 27
Region 0: I/O ports at d000 [size=256]
Region 2: Memory at f0404000 (64-bit, non-prefetchable) [size=4K]
Region 4: Memory at f0400000 (64-bit, prefetchable) [size=16K]
Capabilities: <access denied>
Kernel driver in use: r8169
Kernel modules: r8169
** USB devices:
Bus 004 Device 002: ID 8087:8000 Intel Corp.
Bus 004 Device 001: ID 1d6b:0002 Linux Foundation 2.0 root hub
Bus 003 Device 002: ID 8087:8008 Intel Corp.
Bus 003 Device 001: ID 1d6b:0002 Linux Foundation 2.0 root hub
Bus 002 Device 001: ID 1d6b:0003 Linux Foundation 3.0 root hub
Bus 001 Device 002: ID 051d:0002 American Power Conversion Uninterruptible Power Supply
Bus 001 Device 001: ID 1d6b:0002 Linux Foundation 2.0 root hub
-- System Information:
Debian Release: 9.3
APT prefers stable-updates
APT policy: (500, 'stable-updates'), (500, 'stable')
Architecture: amd64 (x86_64)
Kernel: Linux 4.9.0-4-amd64 (SMP w/2 CPU cores)
Locale: LANG=en_US.UTF-8, LC_CTYPE=en_US.UTF-8 (charmap=UTF-8), LANGUAGE=en_US:en (charmap=UTF-8)
Shell: /bin/sh linked to /bin/dash
Init: systemd (via /run/systemd/system)
Versions of packages linux-image-4.9.0-5-amd64 depends on:
ii initramfs-tools [linux-initramfs-tool] 0.130
ii kmod 23-2
ii linux-base 4.5
Versions of packages linux-image-4.9.0-5-amd64 recommends:
ii firmware-linux-free 3.4
ii irqbalance 1.1.0-2.3
Versions of packages linux-image-4.9.0-5-amd64 suggests:
pn debian-kernel-handbook <none>
ii grub-efi-amd64 2.02~beta3-5
pn linux-doc-4.9 <none>
Versions of packages linux-image-4.9.0-5-amd64 is related to:
pn firmware-amd-graphics <none>
pn firmware-atheros <none>
pn firmware-bnx2 <none>
pn firmware-bnx2x <none>
pn firmware-brcm80211 <none>
pn firmware-cavium <none>
pn firmware-intel-sound <none>
pn firmware-intelwimax <none>
pn firmware-ipw2x00 <none>
pn firmware-ivtv <none>
pn firmware-iwlwifi <none>
pn firmware-libertas <none>
pn firmware-linux-nonfree <none>
pn firmware-misc-nonfree <none>
pn firmware-myricom <none>
pn firmware-netxen <none>
pn firmware-qlogic <none>
ii firmware-realtek 20161130-3
pn firmware-samsung <none>
pn firmware-siano <none>
pn firmware-ti-connectivity <none>
pn xen-hypervisor <none>
-- no debconf information
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