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Bug#549532: marked as done (kernel: invoked oom-killer: gfp_mask=0x1201d2)



Your message dated Sun, 04 Oct 2009 13:20:16 +0100
with message-id <1254658816.2395.52.camel@localhost>
and subject line Re: Bug#549532: kernel: invoked oom-killer: gfp_mask=0x1201d2
has caused the Debian Bug report #549532,
regarding kernel: invoked oom-killer: gfp_mask=0x1201d2
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
549532: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=549532
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: kernel
Severity: important

My system (RHEL 5.4 KVM guest) got unaccessible (*very* high cpu load). After rebooting it and checking the logs, I found out that a kernel issue appears:

ct  4 02:02:14 mubuntos3 mount.davfs: open files exceed max cache size by 685 MiBytes
Oct  4 02:07:38 mubuntos3 mount.davfs: open files exceed max cache size by 685 MiBytes
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241] pop3-login invoked oom-killer: gfp_mask=0x1201d2, order=0, oomkilladj=0
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241] Pid: 15273, comm: pop3-login Not tainted 2.6.26-2-amd64 #1
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241] 
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241] Call Trace:
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241]  [<ffffffff802738c0>] oom_kill_process+0x57/0x1dc
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241]  [<ffffffff8023b551>] __capable+0x9/0x1c
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241]  [<ffffffff80273beb>] badness+0x188/0x1c7
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241]  [<ffffffff80273e1f>] out_of_memory+0x1f5/0x28e
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241]  [<ffffffff80276b70>] __alloc_pages_internal+0x31d/0x3bf
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241]  [<ffffffff80278826>] __do_page_cache_readahead+0x79/0x183
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241]  [<ffffffff802730d5>] filemap_fault+0x15d/0x33c
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241]  [<ffffffff8027e554>] __do_fault+0x50/0x3e6
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241]  [<ffffffff8022f0e8>] hrtick_set+0x9e/0xf7
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241]  [<ffffffff802818b7>] handle_mm_fault+0x3f4/0x867
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241]  [<ffffffff8023d020>] del_timer_sync+0xc/0x16
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241]  [<ffffffff8042916a>] schedule_timeout+0x92/0xad
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241]  [<ffffffff80221fbc>] do_page_fault+0x5d8/0x9c8
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241]  [<ffffffff802710da>] sync_page+0x0/0x41
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241]  [<ffffffff8024acb6>] getnstimeofday+0x39/0x98
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241]  [<ffffffff8022c264>] default_wake_function+0x0/0xe
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241]  [<ffffffff8042a599>] error_exit+0x0/0x60
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241] 
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241] Mem-info:
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241] Node 0 DMA per-cpu:
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241] CPU    0: hi:    0, btch:   1 usd:   0
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241] CPU    1: hi:    0, btch:   1 usd:   0
Oct  4 02:07:38 mubuntos3 kernel: [372811.164241] Node 0 DMA32 per-cpu:
[...]
Oct  4 02:07:42 mubuntos3 kernel: [372811.164241] CPU    0: hi:  186, btch:  31 usd: 181
Oct  4 02:07:42 mubuntos3 kernel: [372811.164241] CPU    1: hi:  186, btch:  31 usd: 158
Oct  4 02:07:42 mubuntos3 kernel: [372811.164241] Active:46691 inactive:46797 dirty:0 writeback:0 unstable:0
Oct  4 02:07:42 mubuntos3 kernel: [372811.164241]  free:1189 slab:8849 mapped:18 pagetables:12688 bounce:0
Oct  4 02:07:42 mubuntos3 kernel: [372811.164241] Node 0 DMA free:2000kB min:60kB low:72kB high:88kB active:988kB inactive:1568kB present:10792kB pages_scanned:3873 all_unreclaimable? yes
Oct  4 02:07:42 mubuntos3 kernel: [372811.164241] lowmem_reserve[]: 0 489 489 489
Oct  4 02:07:42 mubuntos3 kernel: [372811.164241] Node 0 DMA32 free:2756kB min:2796kB low:3492kB high:4192kB active:185776kB inactive:185620kB present:500896kB pages_scanned:723643 all_unreclaimable? yes
Oct  4 02:07:42 mubuntos3 kernel: [372811.164241] lowmem_reserve[]: 0 0 0 0
Oct  4 02:07:42 mubuntos3 kernel: [372811.164241] Node 0 DMA: 114*4kB 11*8kB 1*16kB 1*32kB 0*64kB 1*128kB 1*256kB 2*512kB 0*1024kB 0*2048kB 0*4096kB = 2000kB
Oct  4 02:07:42 mubuntos3 kernel: [372811.164241] Node 0 DMA32: 379*4kB 4*8kB 0*16kB 0*32kB 1*64kB 1*128kB 0*256kB 0*512kB 1*1024kB 0*2048kB 0*4096kB = 2764kB
Oct  4 02:07:42 mubuntos3 kernel: [372811.164241] 99 total pagecache pages
Oct  4 02:07:42 mubuntos3 kernel: [372811.164241] Swap cache: add 6478897, delete 6478897, find 372825/1106998
Oct  4 02:07:42 mubuntos3 kernel: [372811.164241] Free swap  = 0kB
Oct  4 02:07:42 mubuntos3 kernel: [372811.164241] Total swap = 684024kB
Oct  4 02:07:42 mubuntos3 kernel: [372811.168289] 131056 pages of RAM
Oct  4 02:07:42 mubuntos3 kernel: [372811.168289] 3384 reserved pages
Oct  4 02:07:42 mubuntos3 kernel: [372811.168289] 2480 pages shared
Oct  4 02:07:42 mubuntos3 kernel: [372811.168289] 0 pages swap cached
Oct  4 02:07:42 mubuntos3 kernel: [372811.168289] Out of memory: kill process 16835 (mysqld) score 101365 or a child
Oct  4 02:07:42 mubuntos3 kernel: [372811.168289] Killed process 16835 (mysqld)
Oct  4 02:07:42 mubuntos3 kernel: >] system_call_after_swapgs+0x8a/0x8f
Oct  4 02:07:42 mubuntos3 kernel: [372927.778448] 
Oct  4 02:07:42 mubuntos3 kernel: [372927.778451] INFO: task bzip2:18310 blocked for more than 120 seconds.
Oct  4 02:07:42 mubuntos3 kernel: [372927.779017] "echo 0 > /proc/sys/kernel/hung_task_timeout_secs" disables this message.
Oct  4 02:07:42 mubuntos3 kernel: [372927.779915] bzip2         D 00007fbfcd336000     0 18310  18309
Oct  4 02:07:42 mubuntos3 kernel: [372927.779918]  ffff810001d1be90 0000000000000086 00003ffffffff000 ffff810001d15600
Oct  4 02:07:42 mubuntos3 kernel: [372927.779921]  ffff810001a33570 ffff810000d93430 ffff810001a337f8 0000000101018880
Oct  4 02:07:42 mubuntos3 kernel: [372927.779923]  ffff8100038a53f8 0000000000000168 ffff8100197b4330 0000000000000001
Oct  4 02:07:42 mubuntos3 kernel: [372927.779926] Call Trace:
Oct  4 02:07:42 mubuntos3 kernel: [372927.779934]  [<ffffffff8042952d>] __mutex_lock_slowpath+0x64/0x9b
Oct  4 02:07:42 mubuntos3 kernel: [372927.779938]  [<ffffffff80429392>] mutex_lock+0xa/0xb
Oct  4 02:07:42 mubuntos3 kernel: [372927.779943]  [<ffffffffa028cfa8>] :fuse:fuse_direct_write+0x2e/0x76
Oct  4 02:07:42 mubuntos3 kernel: [372927.779947]  [<ffffffff8029b4e5>] vfs_write+0xad/0x156
Oct  4 02:07:42 mubuntos3 kernel: [372927.779950]  [<ffffffff8029ba87>] sys_write+0x45/0x6e
Oct  4 02:07:42 mubuntos3 kernel: [372927.779954]  [<ffffffff8020beca>] system_call_after_swapgs+0x8a/0x8f
Oct  4 02:07:42 mubuntos3 kernel: [372927.779959] 

I have been running a backup script which bzips some important files to a WebDAV server today, but it had been working flawlessly a few times before.

-- System Information:
Debian Release: 5.0.3
  APT prefers stable
  APT policy: (500, 'stable')
Architecture: amd64 (x86_64)

Kernel: Linux 2.6.26-2-amd64 (SMP w/2 CPU cores)
Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8)
Shell: /bin/sh linked to /bin/bash



--- End Message ---
--- Begin Message ---
On Sun, 2009-10-04 at 02:58 +0200, Martin Jürgens wrote:
> Package: kernel
> Severity: important
> 
> My system (RHEL 5.4 KVM guest) got unaccessible (*very* high cpu load). After rebooting it and checking the logs, I found out that a kernel issue appears:
> 
> ct  4 02:02:14 mubuntos3 mount.davfs: open files exceed max cache size by 685 MiBytes
> Oct  4 02:07:38 mubuntos3 mount.davfs: open files exceed max cache size by 685 MiBytes
> Oct  4 02:07:38 mubuntos3 kernel: [372811.164241] pop3-login invoked oom-killer: gfp_mask=0x1201d2, order=0, oomkilladj=0
> Oct  4 02:07:38 mubuntos3 kernel: [372811.164241] Pid: 15273, comm: pop3-login Not tainted 2.6.26-2-amd64 #1
[...]

This is not a kernel bug.  Your WebDAV server appears to be storing the
entire file in memory, and VM guests generally do not have swap space.
You should consider increasing the memory size for this guest.

Ben.

-- 
Ben Hutchings
I say we take off; nuke the site from orbit.  It's the only way to be sure.

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