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suspending programs softly

 i usually run large simulations, and it happened sometimes power to go down suddenly, i don't
know why.
 I have a UPS linked to my desktop (Debian Woody, 2.4.21), but i do not know how to suspend the
simulation running while UPS keeps the pc on for a short time (10 minutes) before everything goes
 I'd like to restart my programs just at the same point where they have been suspended.
 Any suggestions welcome.

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