Bug#974879: marked as done (ITP: intervalstorej -- Java implementation of the Nested Containment List data structure)
Your message dated Sat, 21 Nov 2020 22:00:09 +0000
with message-id <E1kgavR-000Iiz-UZ@fasolo.debian.org>
and subject line Bug#974879: fixed in intervalstorej 1.2+dfsg-1
has caused the Debian Bug report #974879,
regarding ITP: intervalstorej -- Java implementation of the Nested Containment List data structure
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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974879: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=974879
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--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Debian Java team <debian-java@lists.debian.org>
X-Debbugs-Cc: debian-devel@lists.debian.org, debian-java@lists.debian.org
* Package name : intervalstorej
Version : 1.2
Upstream Author : Mungo Carstairs, Barton Group
* URL : https://github.com/bartongroup/IntervalStoreJ/
* License : BSD-3-clause
Programming Lang: Java
Description : Java implementation of the Nested Containment List data structure
NCList provides efficient lookup of intervals overlapping a given range in
time O(M log N) where N is the number of intervals stored, and M the number
of overlaps found.
IntervalStore:
- is parameterised by <T extends IntervalI>;
- so can store any Java type that implements IntervalI, that is, has methods
getBegin() and getEnd() (where begin <= end);
- extends java.util.AbstractCollection<T>;
- may be referred to as Collection<T> in code;
- exposes methods for add, contains, remove, iterator, size etc;
- has a 'bulk load' constructor, and methods to add or remove entries, while
retaining lookup efficiency;
- optimises storage and search of sparsely nested intervals by storing
non-nested intervals separately;
- incorporates NCList to store any properly nested intervals.
This package is needed as a dependency of jalview, which is currently updated
as we have a quite old version of it in Debian. jalview now relies on it.
It will be maintained inside the Debian Java team.
--- End Message ---
--- Begin Message ---
Source: intervalstorej
Source-Version: 1.2+dfsg-1
Done: Pierre Gruet <pgtdebian@free.fr>
We believe that the bug you reported is fixed in the latest version of
intervalstorej, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 974879@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Pierre Gruet <pgtdebian@free.fr> (supplier of updated intervalstorej package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Sun, 15 Nov 2020 23:06:45 +0100
Source: intervalstorej
Binary: libintervalstorej-java
Architecture: source all
Version: 1.2+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Java Maintainers <pkg-java-maintainers@lists.alioth.debian.org>
Changed-By: Pierre Gruet <pgtdebian@free.fr>
Description:
libintervalstorej-java - Java implementation of the Nested Containment List data structure
Closes: 974879
Changes:
intervalstorej (1.2+dfsg-1) unstable; urgency=medium
.
* Initial release (Closes: #974879)
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