[covid-19] Gradle help for nextflow needed
Hi,
in our COVID-19 effort the Debian Med team intends to package some
workflows that are useful to detect viruses. A common workflow tool is
nextflow which I in injected into Salsa[1]. The build system uses
gradle where I do not have any experience in. The build log of my weak
attempt is running into:
...
Evaluating root project 'nextflow-prj' using build file '/build/nextflow-20.04.1-edge/build.gradle'.
Compiling build file '/build/nextflow-20.04.1-edge/build.gradle' using SubsetScriptTransformer.
Creating new cache for metadata-2.36/module-metadata, path /build/nextflow-20.04.1-edge/.gradle/caches/modules-2/metadata-2.36/module-metadata.bin, access org.gradle.cache.internal.DefaultCacheAccess@19705650
FAILURE: Build failed with an exception.
* Where:
Build file '/build/nextflow-20.04.1-edge/build.gradle' line: 18
* What went wrong:
Plugin [id: 'io.codearte.nexus-staging', version: '0.21.2'] was not found in any of the following sources:
- Gradle Core Plugins (plugin is not in 'org.gradle' namespace)
- Plugin Repositories (could not resolve plugin artifact 'io.codearte.nexus-staging:io.codearte.nexus-staging.gradle.plugin:0.21.2')
Searched in the following repositories:
Gradle Central Plugin Repository
* Try:
Run with --debug option to get more log output. Run with --scan to get full insights.
* Exception is:
org.gradle.api.plugins.UnknownPluginException: Plugin [id: 'io.codearte.nexus-staging', version: '0.21.2'] was not found in any of the following sources:
- Gradle Core Plugins (plugin is not in 'org.gradle' namespace)
- Plugin Repositories (could not resolve plugin artifact 'io.codearte.nexus-staging:io.codearte.nexus-staging.gradle.plugin:0.21.2')
Searched in the following repositories:
Gradle Central Plugin Repository
at org.gradle.plugin.use.internal.DefaultPluginRequestApplicator.resolveToFoundResult(DefaultPluginRequestApplicator.java:262)
at org.gradle.plugin.use.internal.DefaultPluginRequestApplicator.access$100(DefaultPluginRequestApplicator.java:63)
at org.gradle.plugin.use.internal.DefaultPluginRequestApplicator$1.transform(DefaultPluginRequestApplicator.java:91)
at org.gradle.plugin.use.internal.DefaultPluginRequestApplicator$1.transform(DefaultPluginRequestApplicator.java:88)
at org.gradle.util.CollectionUtils.collect(CollectionUtils.java:203)
at org.gradle.util.CollectionUtils.collect(CollectionUtils.java:198)
...
Any help for a kickstart would be really appreciated.
Kind regards
Andreas.
[1] https://salsa.debian.org/med-team/nextflow
--
http://fam-tille.de
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