Re: Continued build issues with IGV: Could not resolve org.apache.logging.log4j:log4j:debian
On 10/16/2018 02:51 PM, Andreas Tille wrote:
> Hi Olivier,
>
> thanks a lot for looking into this.
I pushed missing d/control dep liblog4j2-java
>
> On Tue, Oct 16, 2018 at 10:45:08AM +0200, Olivier Sallou wrote:
>>
>>> sorry for the private ping, but may be you have an idea how to
>>> build igv?
>> Hi,
>> after lots of fixes, I could get igv build (and had to make a few
>> updates to d/bin/igv too)
>>
>> however, I removed the Java 9 module support for igv itself.. Could not
>> make it build to provide igv as a module, only as a "old" lib/bin
>>
>> could not test due to x11 pb, but it builds and do not complain on
>> missing libs.
>>
>> I pushed all my updates
> I tried to build your latest commit (eaa95f1c [1]) but I get:
>
> ...
> Passing through xalan:serializer:jar:debian
> Passing through commons-logging:commons-logging:jar:debian
> :compileJava FAILED
> :compileJava (Thread[Daemon worker,5,main]) completed. Took 0.64 secs.
>
> FAILURE: Build failed with an exception.
>
> * What went wrong:
> Could not resolve all files for configuration ':compileClasspath'.
>> Could not resolve org.apache.logging.log4j:log4j:debian.
> Required by:
> project :
> > No cached version of org.apache.logging.log4j:log4j:debian available for offline mode.
>> Could not resolve org.apache.logging.log4j:log4j-api:debian.
> Required by:
> project :
> > No cached version of org.apache.logging.log4j:log4j-api:debian available for offline mode.
>> Could not resolve org.apache.logging.log4j:log4j-1.2-api:debian.
> Required by:
> project :
> > No cached version of org.apache.logging.log4j:log4j-1.2-api:debian available for offline mode.
>> Could not resolve org.apache.logging.log4j:log4j-core:debian.
> Required by:
> project :
> > No cached version of org.apache.logging.log4j:log4j-core:debian available for offline mode.
>
> * Try:
> Run with --debug option to get more log output. Run with --scan to get full insights.
>
> * Exception is:
> org.gradle.api.internal.artifacts.ivyservice.DefaultLenientConfiguration$ArtifactResolveException: Could not resolve all files for configuration ':compileClasspath'.
> at org.gradle.api.internal.artifacts.configurations.DefaultConfiguration.rethrowFailure(DefaultConfiguration.java:918)
> at org.gradle.api.internal.artifacts.configurations.DefaultConfiguration.access$1600(DefaultConfiguration.java:116)
> at org.gradle.api.internal.artifacts.configurations.DefaultConfiguration$ConfigurationFileCollection.getFiles(DefaultConfiguration.java:892)
> at org.gradle.api.internal.artifacts.configurations.DefaultConfiguration.getFiles(DefaultConfiguration.java:404)
> ...
> at org.gradle.api.internal.artifacts.ivyservice.ivyresolve.ComponentMetaDataResolveState.resolve(ComponentMetaDataResolveState.java:58)
> at org.gradle.api.internal.artifacts.ivyservice.ivyresolve.RepositoryChainComponentMetaDataResolver.findBestMatch(RepositoryChainComponentMetaDataResolver.java:138)
> at org.gradle.api.internal.artifacts.ivyservice.ivyresolve.RepositoryChainComponentMetaDataResolver.findBestMatch(RepositoryChainComponentMetaDataResolver.java:119)
> at org.gradle.api.internal.artifacts.ivyservice.ivyresolve.RepositoryChainComponentMetaDataResolver.resolveModule(RepositoryChainComponentMetaDataResolver.java:92)
> ... 143 more
>
>
> * Get more help at https://help.gradle.org
>
> BUILD FAILED in 7s
> 1 actionable task: 1 executed
> dh_auto_build: gradle --info --console plain --offline --stacktrace --no-daemon --refresh-dependencies --gradle-user-home .gradle -Duser.home=. -Duser.name=debian -Ddebian.package=igv -Dfile.encoding=UTF-8 --parallel --max-workers=4 jar returned exit code 1
>
>
> in a recent pbuilder chroot.
>
> I would love to test igv, but it seems it does not build reliably. :-(
>
> Kind regards
>
> Andreas.
>
>
> [1] https://salsa.debian.org/med-team/igv/commit/eaa95f1c5d56003c91984f1e2036bbf8bae7fec0
>
--
Olivier Sallou
Univ Rennes, Inria, CNRS, IRISA
Irisa, Campus de Beaulieu
F-35042 RENNES - FRANCE
Tel: 02.99.84.71.95
gpg key id: 4096R/326D8438 (keyring.debian.org)
Key fingerprint = 5FB4 6F83 D3B9 5204 6335 D26D 78DC 68DB 326D 8438
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