Problems building libsbml

[Andreas Tille <andreas@an3as.eu>]

Hi,

when trying to rebuild libsbml[1] (to fix #896531) I get

...
make[4]: Entering directory '/build/libsbml-5.16.0+dfsg/build'
[100%] Generate Java-API Documentation
/build/libsbml-5.16.0+dfsg/docs/src/SBMLDoclet.java:112: error: package com.sun.tools.doclets.standard is not visible
import com.sun.tools.doclets.standard.Standard;
                            ^
  (package com.sun.tools.doclets.standard is declared in module jdk.javadoc, which does not export it)
Note: /build/libsbml-5.16.0+dfsg/docs/src/SBMLDoclet.java uses or overrides a deprecated API.
Note: Recompile with -Xlint:deprecation for details.
Note: /build/libsbml-5.16.0+dfsg/docs/src/SBMLDoclet.java uses unchecked or unsafe operations.
Note: Recompile with -Xlint:unchecked for details.
1 error
make[4]: *** [docs/CMakeFiles/api_docs_java.dir/build.make:62: ../docs/formatted/java-api/index.html] Error 1
make[4]: Leaving directory '/build/libsbml-5.16.0+dfsg/build'
...



I've tried to fix this with a patch[2] but that way I'm running into

...
[100%] Generate Java-API Documentation
/build/libsbml-5.16.0+dfsg/docs/src/SBMLDoclet.java:112: error: package com.sun.tools.doclets.standard is not visible
import com.sun.tools.doclets.standard.Standard;
                            ^
  (package com.sun.tools.doclets.standard is declared in module jdk.javadoc, which does not export it)
/build/libsbml-5.16.0+dfsg/docs/src/SBMLDoclet.java:129: error: no interface expected here
public class SBMLDoclet extends Doclet
                                ^
/build/libsbml-5.16.0+dfsg/docs/src/SBMLDoclet.java:163: error: no interface expected here
        extends Doclet
                ^
/build/libsbml-5.16.0+dfsg/docs/src/SBMLDoclet.java:171: error: cannot find symbol
        public static boolean start(RootDoc root)
                                    ^
  symbol:   class RootDoc
  location: class FileExclusionDoclet
/build/libsbml-5.16.0+dfsg/docs/src/SBMLDoclet.java:197: error: cannot find symbol
                                           DocErrorReporter reporter)
                                           ^
  symbol:   class DocErrorReporter
  location: class FileExclusionDoclet
/build/libsbml-5.16.0+dfsg/docs/src/SBMLDoclet.java:337: error: no interface expected here
        extends Doclet
                ^
/build/libsbml-5.16.0+dfsg/docs/src/SBMLDoclet.java:339: error: cannot find symbol
        private static RootDoc the_root;
                       ^
  symbol:   class RootDoc
  location: class SBMLProcessingDoclet
...



I'm not sure how this should be interpreted in the context of the
patch[3] by Markus Koschany which deals with not-existing doc.  May be
that error existed before but was treated as warning but is turned into
an error now.

Any hint would be welcome

     Andreas.


[1] https://salsa.debian.org/med-team/libsbml
[2] https://salsa.debian.org/med-team/libsbml/blob/master/debian/patches/javadoc.patch
[3] https://salsa.debian.org/med-team/libsbml/blob/master/debian/patches/javadoc_java9.patch

-- 
http://fam-tille.de