Hi Niels, Onkar, On Sun, Aug 5, 2012 at 10:02 AM, Egon Willighagen <egon.willighagen@gmail.com> wrote: > I will have a look the JavaDoc cleaning thing now... I quickly figured out that that would take me more effort, to properly hook that in the Debian build systems... I did have a look at compiling 1.4.12 which resulted in a 1.4.12.1 release I will upload momentarily... In particular, I looked at the 22-foo.patch, and made the following changes in the upstream release: - made the src/META-INF/*.libdepends all use vecmath*.jar - factored out doxygen.xml and devel.xml with the taskdefs that were commented out by the 22-foo.patch, reducing the dependencies, and removes the need for those bits of that patch - refactored build.xml to use properties for jar names, allowing Debian jar file names to be set with ant.properties - applied the encoding patch for the JavaDoc HTML - applied the fixing of finding jars in the JavaDoc HTML creation I updated the debian/* files accordingly; git (svn) patch attached. However, I manually hacked the patch file, and it does not longer patch the build.xml anymore to exclude some 'modules', like inchi, so I cannot build the full .deb package here yet... Egon -- Dr E.L. Willighagen Postdoctoral Researcher Department of Bioinformatics - BiGCaT Maastricht University (http://www.bigcat.unimaas.nl/) Homepage: http://egonw.github.com/ LinkedIn: http://se.linkedin.com/in/egonw Blog: http://chem-bla-ics.blogspot.com/ PubList: http://www.citeulike.org/user/egonw/tag/papers
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