Bug#956456: ITP: idseq-dag -- Pipeline engine for IDseq (Infectious Disease Sequencing Platform)
Package: wnpp
Severity: wishlist
Owner: Emmanuel Arias <eamanu@yaerobi.com>
* Package name : idseq-dag
Version : 4.2.2
Upstream Author : IdSeq Team @ Chan Zuckerberg Initiative
<idseqhelp@chanzuckerberg.com>
* URL : https://github.com/chanzuckerberg/idseq-dag
* License : MIT
Programming Lang: Python
Description : Pipeline engine for IDseq (Infectious Disease Sequencing Platform)
idseq_dag is the pipeline execution engine for idseq (see idseq.net). It is a
pipelining system that implements a directed acyclic graph (DAG) where the nodes
(steps) correspond to individual python classes. The graph is defined using JSON.
.
The pipeline would be executed locally with local machine resources. idseq-dag
could be installed inside a docker container and run inside the container.
.
This is package for COVID-19 Hackathon. This package can be maintained
under med-team umbrella.
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