Bug#841396: ITP: dascrubber -- alignment-based scrubbing pipeline for DNA sequencing reads
Package: wnpp
Severity: wishlist
Owner: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
* Package name : dascrubber
Version : 0~20160601
Upstream Author : Eugene W. Myers, Jr. <gene.myers@gmail.com>
* URL : https://github.com/thegenemyers/DASCRUBBER
* License : BSD
Programming Lang: C
Description : alignment-based scrubbing pipeline for DNA sequencing reads
The Dazzler Scrubbing Suite produces a set of edited reads that are guaranteed
to
* be continuous stretches of the underlying genome (i.e. no unremoved
adapters and not chimers)
* have no very low quality stretches (i.e. the error rate never exceeds some
reasonable maximum, 20% or so in the case of Pacbio data).
Its secondary goal is to do so with the minimum removal of data and splitting
of reads.
This package will be maintained by Debian Med.
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