Package: wnpp
Severity: wishlist
* Package name : jaligner
Version : 1.0
* License : GPL
Programming Lang: Java
Description : implementation of the Smith-Waterman algorithm with Gotoh's improvement
JAligner is an open source Java implementation of the Smith-Waterman
algorithm with Gotoh's improvement for biological local pairwise sequence
alignment with the affine gap penalty model.
jaligner is a dependency of many bioinformatic programs including
trinityrnaseq. The packaging was started by Tim Booth and will be group
maintained by the Debian Med team.