Bug#745847: ITP: perm -- efficient mapping of short reads with periodic spaced seeds

[Andreas Tille <tille@debian.org>]

Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille@debian.org>

* Package name    : perm
  Version         : 0.4.0
  Upstream Author : Yangho Chen <yanghoch@usc.edu>
* URL             : http://code.google.com/p/perm/
* License         : Apache 2.0
  Programming Lang: C++
  Description     : efficient mapping of short reads with periodic spaced seeds
 PerM is a software package which was designed to perform highly efficient
 genome scale alignments for hundreds of millions of short reads produced by
 the ABI SOLiD and Illumina sequencing platforms. Today PerM is capable of
 providing full sensitivity for alignments within 4 mismatches for 50bp SOLID
 reads and 9 mismatches for 100bp Illumina reads.


This package was prepared by the BioLinux team and taken over into Debian Med
team maintenance at

   Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/perm/trunk/