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Bug#435915: ITP: mira -- Whole Genome Shotgun and EST Sequence Assembler

Package: wnpp
Severity: wishlist
Owner: Charles Plessy <charles-debian-nospam@plessy.org>

  Package name    : mira
  Version         : 2.8.2
  Upstream Author : Bastien Chevreux
  URL             : http://chevreux.org/projects_mira.html
  License         : GPL
  Programming Lang: C
  Description     : Whole Genome Shotgun and EST Sequence Assembler

 The mira genome fragment assembler is a specialised assembler for
 sequencing projects classified as 'hard' due to high number of similar
 repeats. For expressed sequence tags (ESTs) transcripts, miraEST is
 specialised on reconstructing pristine mRNA transcripts while
 detecting and classifying single nucleotide polymorphisms (SNP)
 occuring in different variations thereof.
 The assembler is routinely used for such various tasks as mutation
 detection in different cell types, similarity analysis of transcripts
 between organisms, and pristine assembly of sequences from various
 sources for oligo design in clinical microarray experiments.
  Homepage: http://chevreux.org/projects_mira.html

Mira has been freed under the GPL last friday, I will try to package
it quickly to help it having a good start.

Charles Plessy
Wako, Saitama, Japan
Debian-Med packaging team.

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