Bug#426957: ITP: rnahybrid -- Fast and effective prediction of microRNA/target duplexes
Owner: Charles Plessy <email@example.com>
Package name : rnahybrid
Version : 2.1
Upstream Author : Marc Rehmsmeier, Peter Steffen, Matthias Hoechsmann
URL : http://bibiserv.techfak.uni-bielefeld.de/rnahybrid/
License : GPL
Programming Lang: C
Description : Fast and effective prediction of microRNA/target duplexes
RNAhybrid is a tool for finding the minimum free energy hybridisation of a
long and a short RNA. The hybridisation is performed in a kind of domain mode,
ie. The short sequence is hybridised to the best fitting part of the long one.
The tool is primarily meant as a means for microRNA target prediction.
Public research assisted by RNAhybrid should cite:
Marc Rehmsmeier, Peter Steffen, Matthias Höchsmann, Robert Giegerich
Fast and effective prediction of microRNA/target duplexes
RNA, 10:1507-1517, 2004.
I am a bit into miRNA those days and found this program, which is
piece-of-cake to package. It has already manpages - that is quite
exceptional in the field... The package is indeed ready, and I will
forward it to my sponsor when I will have solved a problem of watch
In the meantime, it is accessible on svn:
Debian-Med Packaging Team
Wako, Saitama, Japan