Bug#420938: ITP: mirbase -- The microRNA sequence database
Package: wnpp
Severity: wishlist
Owner: Charles Plessy <charles-debian-nospam@plessy.org>
Package name : mirbase
Version : 9.1
Upstream Author : mirRBase is maintained by the Sanger center <microrna@sanger.ac.uk>
URL : http://microrna.sanger.ac.uk/
License : Public Domain
Programming Lang: miRBase is just data.
Description : The microRNA sequence database
The miRBase Sequence Database provides a searchable repository
for published microRNA sequences and associated annotation,
functionality previously provided by the microRNA Registry. miRBase
also contains predicted miRNA target genes in miRBase Targets, and
provides a gene naming and nomenclature function in the miRBase
Registry.
.
Release 9.1 of the database contains 4449 entries representing hairpin
precursor miRNAs, expressing 4274 mature miRNA products, in primates,
rodents, birds, fish, worms, flies, plants and viruses.
.
This package will install the miRBase database for mySQL, EMBOSS, and/or
ncbi-blast if you have the corresponding packages installed.
.
Homepage: http://microrna.sanger.ac.uk/
Although the number of known micro-ribonucleic acids is growing, I
thinkt that mirBAse will stay reasonably slim: the "micro" in the name
was not picked by chance... miRBase 9.1 is 3 Mo uncompressed and 1 Mo
gzipped.
--
Charles Plessy
Debian-Med packaging team.
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