Bug#319330: ITP: mipe -- [Biology] Tools for storing data on PCR experiments
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller <moeller@pzr.uni-rostock.de>
* Package name : mipe
Version : 1.1
Upstream Author : Jan Aerts <jan.aerts@bbsrc.ac.uk>
* URL : http://mipe.sourceforge.net
* License : LGPL
Description : [Biology] Tool to store data on PCR-derived experiments
To provide a standard format to exchange and/or storage
of all information associated with PCR experiments using a flat text file.
This will:
* allow for exchange of PCR data between researchers/laboratories
* enable traceability of the data
* prevent problems when submitting data to dbSTS or dbSNP
* enable the writing of standard scripts to extract data (e.g.
* provide a list of PCR primers, SNP positions or haplotypes for
different animals)
.
Although this tool can be used for data storage, it's primary focus
should be data exchange. For larger reporisitories, relational databases
are more appropriate for storage of these data. The MIPE format could
then be used as a standard format to import into and/or export from
these databases.
.
Homepage: http://mipe.sourceforge.net
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