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Hash: SHA512
Format: 1.8
Date: Mon, 26 May 2025 11:57:59 -0400
Source: ncbi-entrez-direct
Architecture: source
Version: 24.0.20250523+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Aaron M. Ucko <ucko@debian.org>
Changes:
ncbi-entrez-direct (24.0.20250523+dfsg-1) unstable; urgency=medium
.
* New upstream release; as with 19.0.20230216(+dfsg), the nominal major
version bump isn't as meaningful as it might appear.
* debian/install: Install *.ini to /etc/ncbi.
* debian/links: Symlink them into /usr/lib/ncbi-entrez-direct.
* debian/man/{accn-at-a-time,align-columns,archive-{pmc,pubmed,taxonomy},
asn2ref,between-two-genes,cit2pmid,combine-uid-lists,csv2xml,
custom-index,difference-uid-lists,disambiguate-nucleotides,
download-{ncbi-data,pmc,pubmed,sequence},ds2pme,edict,efetch(.ncbi),
efilter,einfo.ncbi,elink,epost,esample,esearch,esummary,
exclude-uid-lists,expand-current,filter-columns,filter-stop-words,
gene2range,gm2segs,intersect-uid-lists,join-into-groups-of,nquire,
pm-prepare,pm-refresh,pma2apa,pma2pme,pmc2bioc,pmc2info,print-columns,
rchive,ref2pmid,reorder-columns,snp2tbl,sort-{table,uniq-count(-rank)},
spdi2tbl,transmute,uniq-table,word-at-a-time,xml2fsa,xml2tbl,xtract}.1:
Update fully. Across the board, substitute EDIRECT_LOCAL_ARCHIVE for
EDIRECT_LOCAL_MASTER, update and symmetrize SEE ALSO, standardize on
man1/-less .so directives, and generally copy-edit.
* debian/man/{archive-{nihocc,nlmnlp,nmcds,pids},args2slice,bsmp2info,
download-flatfile,ecollect,filter-{genbank,record},fsa2xml,
gbf2{facds,fsa,info,tbl},gff-sort,gff2xml,jsonl2xml,just-top-hits,
pair-at-a-time,pm-clean,pm-setup,print-missing-subranges,
quote-grouped-elements,refseq-nm-cds,sort-by-length,
systematic-mutations,xfetch,xfilter,xinfo,xlink,xsearch}.1: Document
commands added upstream since version 20.4.20230911(+dfsg).
* debian/man/{fetch-*,index-extras,phrase-search,stream-pubmed,
theme-aliases}.1: Remove (commands replaced or retired upstream since
version 20.4.20230911[+dfsg]).
* debian/manpages: Rename back from manpages.disabled.
* debian/rules: Move ecollect to ECOMMON_SCRIPTS and cit2pmid, pm-clean,
pm-prepare, and pm-setup to XCOMMON_SCRIPTS, in all cases from
AS_IS_SCRIPTS, so they know to look in /usr/lib/ncbi-entrez-direct as
needed, at minimum for [ex]common.sh.
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