Accepted python-biopython 1.49-1 (source all powerpc)
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Hash: SHA1
Format: 1.8
Date: Fri, 23 Jan 2009 22:19:50 +0900
Source: python-biopython
Binary: python-biopython python-biopython-doc python-biopython-sql python-biopython-martel
Architecture: source all powerpc
Version: 1.49-1
Distribution: unstable
Urgency: low
Maintainer: Debian-Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Charles Plessy <plessy@debian.org>
Description:
python-biopython - Python library for bioinformatics
python-biopython-doc - Documentation for the Biopython library
python-biopython-martel - Flat file parser for the Biopython library
python-biopython-sql - SQL support for the Biopython library
Closes: 478457
Changes:
python-biopython (1.49-1) unstable; urgency=low
.
* New upstream release.
- uses NumPy rather than its precursor Numeric (Closes: #478457)
- Martel, Bio.Mindy, Bio.MetaTool, Bio.EUtils, Bio.Saf, Bio.NBRF, and
Bio.IntelliGenetics are deprecated.
- Bio.PubMed and the online code in Bio.GenBank are now considered obsolete
and will be deprecated in a future release.
- Bio.Fasta is also considered to be obsolete and will eventually be
deprecated.
* debian/control:
- added myself as Uploader.
- depends on python-numpy instead of python-numeric-ext.
- moved python-martel to oldlibs section, priority extra as it is
deprecated, and indicate this in the description.
- build-depend on python-mysqldb and wise for the tests after building.
* Use Debhelper 7 (debian/co{ntrol,mpat}).
* debian/copyright: added myself to the Hall of Fame and updated to latest
draft of the machine-readable format.
* debian/watch: makes beta versions lower by prepending a tilde between
numbers and letters (1.49b -> 1.49~b).
* mmCIF support enabled:
- debian/patches/01-enable-mmCIF.patch: as the name indicates ;)
- debian/rules: patch and unpatch through /usr/share/quilt/quilt.make.
- debian/control: build-depends on quilt.
* debian/python-biopython-doc.doc-base: corrected index name that was changed
upstream.
* debian/patches/02-fix-wise-test.patch: prevents tests failing with Debian's
version of Wise.
* debian/rules: perform tests after build.
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db119bcd50045b18c086bce1df9e86dab9202f22 989748 python-biopython_1.49-1_powerpc.deb
Checksums-Sha256:
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Files:
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ca9999280295dca2c41544245dac9813 60634 oldlibs extra python-biopython-martel_1.49-1_all.deb
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Accepted:
python-biopython-doc_1.49-1_all.deb
to pool/main/p/python-biopython/python-biopython-doc_1.49-1_all.deb
python-biopython-martel_1.49-1_all.deb
to pool/main/p/python-biopython/python-biopython-martel_1.49-1_all.deb
python-biopython-sql_1.49-1_all.deb
to pool/main/p/python-biopython/python-biopython-sql_1.49-1_all.deb
python-biopython_1.49-1.diff.gz
to pool/main/p/python-biopython/python-biopython_1.49-1.diff.gz
python-biopython_1.49-1.dsc
to pool/main/p/python-biopython/python-biopython_1.49-1.dsc
python-biopython_1.49-1_powerpc.deb
to pool/main/p/python-biopython/python-biopython_1.49-1_powerpc.deb
python-biopython_1.49.orig.tar.gz
to pool/main/p/python-biopython/python-biopython_1.49.orig.tar.gz
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