[Date Prev][Date Next] [Thread Prev][Thread Next] [Date Index] [Thread Index]

Bug#1003061: dmrgpp: autopkgtest failure on armhf: segmentation fault



Source: dmrgpp
Version: 6.02-2
X-Debbugs-CC: debian-ci@lists.debian.org
Severity: serious
User: debian-ci@lists.debian.org
Usertags: fails-always timeout

Dear maintainer(s),

You recently added an autopkgtest to your package dmrgpp, great. However, it fails. Currently this failure is blocking the migration to testing [1]. Can you please investigate the situation and fix it?

I copied some of the output at the bottom of this report. Apperently the crash also doesn't stop the test, as it times out after 2:47h.

More information about this bug and the reason for filing it can be found on
https://wiki.debian.org/ContinuousIntegration/RegressionEmailInformation

Paul

[1] https://qa.debian.org/excuses.php?package=dmrgpp

https://ci.debian.net/data/autopkgtest/testing/armhf/d/dmrgpp/17804986/log.gz

Cloning into 'OraclesDmrg'...
From https://code.ornl.gov/gonzalo_3/OraclesDmrg
 * branch            features   -> FETCH_HEAD
Already up to date.
'../src/dmrg' -> 'tests/dmrg'
'../src/observe' -> 'tests/observe'
./ci.pl: WARNING: Ignored test 0 because it's an SU(2) test and you did not specify -su2 ./ci.pl: WARNING: Ignored test 1 because it's an SU(2) test and you did not specify -su2
./ci.pl: Batch2.pbs written
./ci.pl: Batch3.pbs written
./ci.pl: Batch4.pbs written
./ci.pl: Batch5.pbs written
./ci.pl: WARNING: Ignored test 6 because it's an SU(2) test and you did not specify -su2
./ci.pl: Batch7.pbs written
./ci.pl: Batch8.pbs written
./ci.pl: Batch9.pbs written
./ci.pl: Batch10.pbs written
./ci.pl: Batch11.pbs written
./ci.pl: Batch12.pbs written
./ci.pl: Batch15.pbs written
./ci.pl: Batch18.pbs written
./ci.pl: Batch20.pbs written
./ci.pl: Batch20.pbs has been written in append mode.
./ci.pl: Batch22.pbs written
./ci.pl: Batch23.pbs written
./ci.pl: Batch23.pbs has been written in append mode.
./ci.pl: Batch25.pbs written
./ci.pl: Batch26.pbs written
./ci.pl: Batch28.pbs written
./ci.pl: Batch28.pbs has been written in append mode.
./ci.pl: Batch30.pbs written
./ci.pl: Batch32.pbs written
./ci.pl: WARNING: Ignored test 40 because it's an SU(2) test and you did not specify -su2 ./ci.pl: WARNING: Ignored test 41 because it's an SU(2) test and you did not specify -su2
./ci.pl: Batch50.pbs written
./ci.pl: Batch52.pbs written
./ci.pl: Batch60.pbs written
./ci.pl: Batch61.pbs written
./ci.pl: Batch62.pbs written
./ci.pl: Batch62.pbs has been written in append mode.
./ci.pl: Batch65.pbs written
./ci.pl: WARNING: Ignored test 66 because it's an SU(2) test and you did not specify -su2 ./ci.pl: WARNING: Ignored test 67 because it's an SU(2) test and you did not specify -su2
./ci.pl: Batch80.pbs written
./ci.pl: Batch82.pbs written
./ci.pl: Batch84.pbs written
./ci.pl: Batch85.pbs written
./ci.pl: Batch86.pbs written
./ci.pl: Batch100.pbs written
./ci.pl: Batch101.pbs written
./ci.pl: Batch103.pbs written
./ci.pl: Batch105.pbs written
./ci.pl: Batch105.pbs has been written in append mode.
./ci.pl: Batch112.pbs written
./ci.pl: Batch113.pbs written
./ci.pl: Batch120.pbs written
./ci.pl: Batch120.pbs has been written in append mode.
./ci.pl: Batch126.pbs written
./ci.pl: Batch126.pbs has been written in append mode.
./ci.pl: Batch150.pbs written
./ci.pl: Batch170.pbs written
./ci.pl: Batch172.pbs written
./ci.pl: Batch200.pbs written
./ci.pl: Batch200.pbs has been written in append mode.
./ci.pl: Batch250.pbs written
./ci.pl: Batch320.pbs written
./ci.pl: Batch340.pbs written
./ci.pl: Batch363.pbs written
./ci.pl: Batch410.pbs written
./ci.pl: Batch467.pbs written
./ci.pl: Batch550.pbs written
./ci.pl: Batch600.pbs written
./ci.pl: Batch1000.pbs written
./ci.pl: Batch1200.pbs written
./ci.pl: Batch1201.pbs written
./ci.pl: Batch1300.pbs written
./ci.pl: Batch1302.pbs written
./ci.pl: Batch1304.pbs written
./ci.pl: Batch1306.pbs written
./ci.pl: Batch1500.pbs written
./ci.pl: Batch1600.pbs written
./ci.pl: Batch1601.pbs written
./ci.pl: Batch1610.pbs written
./ci.pl: Batch1800.pbs written
./ci.pl: Batch1800.pbs has been written in append mode.
./ci.pl: Batch1810.pbs written
./ci.pl: Batch1810.pbs has been written in append mode.
./ci.pl: Batch1814.pbs written
./ci.pl: Batch1814.pbs has been written in append mode.
./ci.pl: Batch1814.pbs has been written in append mode.
./ci.pl: Batch1818.pbs written
./ci.pl: Batch1818.pbs has been written in append mode.
./ci.pl: Batch1850.pbs written
./ci.pl: Batch1850.pbs has been written in append mode.
./ci.pl: Batch1860.pbs written
./ci.pl: Batch1860.pbs has been written in append mode.
./ci.pl: Batch1950.pbs written
./ci.pl: Batch1950.pbs has been written in append mode.
./ci.pl: Batch1954.pbs written
./ci.pl: Batch1954.pbs has been written in append mode.
./ci.pl: Batch2021.pbs written
./ci.pl: Batch2024.pbs written
./ci.pl: Batch2028.pbs written
./ci.pl: Batch2029.pbs written
./ci.pl: Batch2040.pbs written
./ci.pl: Batch2045.pbs written
./ci.pl: Batch2048.pbs written
./ci.pl: Batch2061.pbs written
./ci.pl: Batch2071.pbs written
./ci.pl: Batch2080.pbs written
./ci.pl: Batch2080.pbs has been written in append mode.
./ci.pl: Batch2100.pbs written
./ci.pl: Batch2100.pbs has been written in append mode.
./ci.pl: Batch2100.pbs has been written in append mode.
./ci.pl: Batch2300.pbs written
./ci.pl: Batch2500.pbs written
./ci.pl: Batch2510.pbs written
./ci.pl: Batch2700.pbs written
./ci.pl: Batch3000.pbs written
./ci.pl: Batch3001.pbs written
./ci.pl: Batch3002.pbs written
./ci.pl: Batch3003.pbs written
./ci.pl: Batch3004.pbs written
./ci.pl: Batch3005.pbs written
./ci.pl: Batch3006.pbs written
./ci.pl: Batch3007.pbs written
./ci.pl: Batch3008.pbs written
./ci.pl: Batch3009.pbs written
./ci.pl: Batch3010.pbs written
./ci.pl: Batch3011.pbs written
./ci.pl: Batch3020.pbs written
./ci.pl: Batch3020.pbs has been written in append mode.
./ci.pl: Batch3100.pbs written
./ci.pl: Batch3510.pbs written
./ci.pl: Batch3510.pbs has been written in append mode.
./ci.pl: Batch3510.pbs has been written in append mode.
./ci.pl: Batch3530.pbs written
./ci.pl: Batch3530.pbs has been written in append mode.
./ci.pl: Batch4300.pbs written
./ci.pl: Batch4500.pbs written
./ci.pl: Batch4600.pbs written
./ci.pl: Batch4600.pbs has been written in append mode.
./ci.pl: Batch4650.pbs written
./ci.pl: Batch4700.pbs written
./ci.pl: Batch4710.pbs written
./ci.pl: Batch4720.pbs written
./ci.pl: Batch4800.pbs written
./ci.pl: Batch4804.pbs written
./ci.pl: Batch4808.pbs written
./ci.pl: Batch5500.pbs written
./ci.pl: Batch5500.pbs has been written in append mode.
./ci.pl: Batch5500.pbs has been written in append mode.
./ci.pl: Batch5500.pbs has been written in append mode.
./ci.pl: Batch5500.pbs has been written in append mode.
./ci.pl: Batch5600.pbs written
./ci.pl: Batch5600.pbs has been written in append mode.
./ci.pl: Batch5700.pbs written
./ci.pl: Batch5800.pbs written
./ci.pl: Batch5802.pbs written
./ci.pl: Batch5810.pbs written
./ci.pl: Batch6000.pbs written
./ci.pl: Batch6001.pbs written
./ci.pl: Batch6005.pbs written
./ci.pl: Batch6010.pbs written
./ci.pl: Batch6020.pbs written
./ci.pl: Batch6500.pbs written
./ci.pl: Batch6700.pbs written
./ci.pl: Submitted Batch2.pbs  Batch2.pbs
|2| has 1 observe lines
|2|: postTest ./observe -f ../inputs/input2.ain "<gs|c';c|gs>,<gs|2.0*sz;2.0*sz|gs>,<gs|n;n|gs>" >> observe2.txt
|29| has 1 dmrg lines
|50| has 1 dmrg lines
|50| has 1 getTimeObservablesInSitu lines
|52| has 1 dmrg lines
|52| has 2 getTimeObservablesInSitu lines
|61| has 1 observe lines
|61|: postTest ./observe -f ../inputs/input61.inp "<Q0|c?0';c?1'|Q1>" >> observe61.txt
|63| has 1 dmrg lines
|63| has 1 CollectBrakets lines
|106| has 1 dmrg lines
|106| has 1 CollectBrakets lines
|112| has 1 observe lines
|112|: postTest ./observe -f ../inputs/input112.inp "<gs|c';c|gs>,<gs|2.0*sz;2.0*sz|gs>,<gs|n;n|gs>" >> observe112.txt
|113| has 1 observe lines
|113|: postTest ./observe -f ../inputs/input113.inp "<gs|c';c|gs>,<gs|2.0*sz;2.0*sz|gs>,<gs|n;n|gs>" >> observe113.txt
|121| has 1 dmrg lines
|121| has 1 CollectBrakets lines
|127| has 1 dmrg lines
|127| has 1 CollectBrakets lines
|150| has 1 observe lines
|150|: postTest ./observe -f ../inputs/input150.inp "<gs|c';c|gs>,<gs|2.0*sz;2.0*sz|gs>,<gs|n;n|gs>" >> observe150.txt
|250| has 1 dmrg lines
|363| has 1 observe lines
|363|: postTest ./observe -f ../inputs/input363.inp "<gs|c?0'*c?0|gs>,<gs|c?0'*c?1|gs>,<gs|c?0'*c?2|gs>,<gs|c?0'*c?3|gs>,<gs|c?1'*c?1|gs>,<gs|c?1'*c?2|gs>,<gs|c?1'*c?3|gs>,<gs|c?2'*c?2|gs>,<gs|c?2'*c?3|gs>,<gs|c?3'*c?3|gs>,ss" >> observe363.txt
|467| has 1 observe lines
|467|: postTest ./observe -f ../inputs/input467.inp "<gs|c?0'*c?0|gs>,<gs|c?0'*c?1|gs>,<gs|c?1'*c?1|gs>,ss" >> observe467.txt
|1500| has 1 dmrg lines
|1500| has 2 metts lines
|1801| has 3 getEnergyAncilla lines
|1811| has 3 getEnergyAncilla lines
|1851| has 3 getEnergyAncilla lines
|1861| has 3 getEnergyAncilla lines
|1951| has 3 getEnergyAncilla lines
|2102| has 1 dmrg lines
|2102| has 1 CollectBrakets lines
|2300| has 1 observe lines
|2300|: postTest ./observe -f ../inputs/input2300.inp "<gs|c';c|gs>,<gs|2.0*sz;2.0*sz|gs>,<gs|n;n|gs>" >> observe2300.txt
|3511| has 1 dmrg lines
|3511| has 1 procOmegas lines
|3512| has 1 dmrg lines
|3512| has 1 procOmegas lines
|3532| has 1 dmrg lines
|3532| has 1 procOmegas lines
|4300| has 2 observe lines
|4300|: postTest ./observe -f ../inputs/input4300.inp ss,'<gs|:../inputs/sz4300.txt[1];:../inputs/sz4300.txt[3];:../inputs/sz4300.txt[6];:../inputs/sz4300.txt[7]|gs>' >> observe4300.txt |4300|: postTest ./observe -f ../inputs/input4300.inp '<gs|:../inputs/sz4300.txt[1];:../inputs/sz4300.txt[3];:../inputs/sz4300.txt[6]|gs>' >> observe4300.txt
|4601| has 1 dmrg lines
|4601| has 1 CollectBrakets lines
|4800| has 1 observe lines
|4800|: postTest ./observe -f ../inputs/input4800.inp "<gs|c';c|gs>,<gs|2.0*sz;2.0*sz|gs>,<gs|n;n|gs>" >> observe4800.txt
|4808| has 1 observe lines
|4808|: postTest ./observe -f ../inputs/input4808.inp "<gs|c';c|gs>,<gs|2.0*sz;2.0*sz|gs>,<gs|n;n|gs>" >> observe4808.txt
|5500| has 1 dmrg lines
|5501| has 1 dmrg lines
|5501| has 1 CollectBrakets lines
|5502| has 1 dmrg lines
|5502| has 1 CollectBrakets lines
|5503| has 1 dmrg lines
|5503| has 1 CollectBrakets lines
|5504| has 1 dmrg lines
|5504| has 1 CollectBrakets lines
|5600| has 1 observe lines
|5600|: postTest ./observe -f ../inputs/input5600.inp "<gs|n|gs>" >> observe5600.txt
|5600| has 1 nDollar lines
|5601| has 1 dmrg lines
|5802| has 1 observe lines
|5802|: postTest ./observe -f ../inputs/input5802.inp "<gs|:../inputs/AThreeHalvesOneHalfDagger_AOneHalfOneHalf.txt|gs>" >> observe5802.txt
|6005| has 1 dmrg lines
|6005| has 1 CollectBrakets lines
|6005| has 1 observe lines
|6005|: postTest ./observe -f ../inputs/input6005.inp "<gs|sy?0|gs>" >> observe6005.txt
|6700| has 1 observe lines
|6700|: postTest ./observe -f ../inputs/input6700.ain "<gs|c';c|gs>,<gs|2.0*sz;2.0*sz|gs>,<gs|n;n|gs>" >> observe6700.txt
Engine/ObserverHelper.h read 0 out of 14
Engine/ObserverHelper.h read 1 out of 14
Engine/ObserverHelper.h read 2 out of 14
Engine/ObserverHelper.h read 3 out of 14
Engine/ObserverHelper.h read 4 out of 14
Engine/ObserverHelper.h read 5 out of 14
Engine/ObserverHelper.h read 6 out of 14
Engine/ObserverHelper.h read 7 out of 14
Engine/ObserverHelper.h read 8 out of 14
Engine/ObserverHelper.h read 9 out of 14
Engine/ObserverHelper.h read 10 out of 14
Engine/ObserverHelper.h read 11 out of 14
Engine/ObserverHelper.h read 12 out of 14
Engine/ObserverHelper.h read 13 out of 14
./ci.pl: Submitted Batch3.pbs  Batch3.pbs
Batch3.pbs: line 9: 2907 Segmentation fault ./dmrg -f ../inputs/input3.ain &> output3.txt
./ci.pl: Submitted Batch4.pbs  Batch4.pbs
autopkgtest [09:11:32]: ERROR: timed out on command "su -s /bin/bash debci -c set -e; export USER=`id -nu`; . /etc/profile >/dev/null 2>&1 || true; . ~/.profile >/dev/null 2>&1 || true; buildtree="/tmp/autopkgtest-lxc.kj65fnub/downtmp/build.XtW/src"; mkdir -p -m 1777 -- "/tmp/autopkgtest-lxc.kj65fnub/downtmp/command1-artifacts"; export AUTOPKGTEST_ARTIFACTS="/tmp/autopkgtest-lxc.kj65fnub/downtmp/command1-artifacts"; export ADT_ARTIFACTS="$AUTOPKGTEST_ARTIFACTS"; mkdir -p -m 755 "/tmp/autopkgtest-lxc.kj65fnub/downtmp/autopkgtest_tmp"; export AUTOPKGTEST_TMP="/tmp/autopkgtest-lxc.kj65fnub/downtmp/autopkgtest_tmp"; export ADTTMP="$AUTOPKGTEST_TMP"; export DEBIAN_FRONTEND=noninteractive; export LANG=C.UTF-8; export DEB_BUILD_OPTIONS=parallel=160; unset LANGUAGE LC_CTYPE LC_NUMERIC LC_TIME LC_COLLATE LC_MONETARY LC_MESSAGES LC_PAPER LC_NAME LC_ADDRESS LC_TELEPHONE LC_MEASUREMENT LC_IDENTIFICATION LC_ALL;rm -f /tmp/autopkgtest_script_pid; set -C; echo $$ > /tmp/autopkgtest_script_pid; set +C; trap "rm -f /tmp/autopkgtest_script_pid" EXIT INT QUIT PIPE; cd "$buildtree"; touch /tmp/autopkgtest-lxc.kj65fnub/downtmp/command1-stdout /tmp/autopkgtest-lxc.kj65fnub/downtmp/command1-stderr; bash -ec 'set -efu ; cp -rf scripts TestSuite "$AUTOPKGTEST_TMP" ; cd "$AUTOPKGTEST_TMP" ; mkdir -p src ; cp -f /usr/bin/dmrg `find /usr/lib -name observe -type f` src ; git clone https://code.ornl.gov/gonzalo_3/OraclesDmrg.git ; cd "$AUTOPKGTEST_TMP"/OraclesDmrg ; git pull origin features ; cd "$AUTOPKGTEST_TMP"/TestSuite ; rm -Rf tests/ ; cp -f batchDollarized.pbs.sample batchDollarized.pbs ; ./ci.pl -n "0-*" -S bash ; ./postCi.pl -g "$AUTOPKGTEST_TMP"/OraclesDmrg/oracles/tests -n '\''0-*'\''' 2> >(tee -a /tmp/autopkgtest-lxc.kj65fnub/downtmp/command1-stderr >&2) > >(tee -a /tmp/autopkgtest-lxc.kj65fnub/downtmp/command1-stdout);" (kind: test)
autopkgtest [09:11:32]: test command1

Attachment: OpenPGP_signature
Description: OpenPGP digital signature


Reply to: