Wishlist for the sprinters.
Hello everybody,
I am recovering from a server crash and a grant application writing, so my mail
box has one thousand unread emails… Luckily, this includes commit messages.
I wish an excellent sprint meeting to everybody. It just came to my mind that I
could try to make a wish in case some Java experts are around.
We need snappy-java to be packaged in order to update picard-tools, which has some
nice options that samtools does not have, like merging two FASTQ files in a single
paire-end unaligned BAM file.
Here are links my ITP and temporary package.
http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=636181
http://anonscm.debian.org/gitweb/?p=users/plessy/snappy-java.git
The problem that I do not manage to solve, is how to make snappy-java use Debian's
packaged snappy library.
http://lists.debian.org/debian-java/2011/11/msg00008.html
If it happens to be an easy problem for one of you, I would be
really greatful if you could give it a try !
Cheers,
--
Charles Plessy
Debian Med packaging team
http://www.debian.org/devel/debian-med
Tsurumi, Kanagawa, Japan
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