Accepted genometools 1.5.0-1 (source amd64 all)
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Hash: SHA1
Format: 1.8
Date: Tue, 05 Feb 2013 18:52:22 +0100
Source: genometools
Binary: genometools genometools-common libgenometools0 libgenometools0-dev genometools-doc genometools-dbg python-genometools
Architecture: source amd64 all
Version: 1.5.0-1
Distribution: unstable
Urgency: low
Maintainer: Sascha Steinbiss <steinbiss@zbh.uni-hamburg.de>
Changed-By: Sascha Steinbiss <steinbiss@zbh.uni-hamburg.de>
Description:
genometools - versatile genome analysis toolkit
genometools-common - shared data files for GenomeTools
genometools-dbg - versatile genome analysis toolkit, with debug symbols
genometools-doc - documentation for GenomeTools
libgenometools0 - versatile genome analysis library
libgenometools0-dev - development files for GenomeTools
python-genometools - Python bindings for genometools
Changes:
genometools (1.5.0-1) unstable; urgency=low
.
* New upstream release
* bugfixes and cleanups
* development tool `gt sain' added to run an induced suffix array sorting
algorithm
* the -typecheck option in the `gt gff3` and `gt gff3validator` tools
now also validates parent (part-of) relationships, see -help output for
details
* new option -encseq besides -seqfile(s) and -regionmapping to select a
encseq index as a sequence source
* GtBioseq backend switched to GtEncseq
* GtSeqCol is now an interface, GtEncseqCol added
* GtRankedList added
* GtSNPAnnotatorStream and `gt snpper' tool added
* node sorting code is now aware of MD5 hash presence
* compatibility with old Pango versions inproved
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