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Bug#1108193: marked as done (apt: Ordering issue with libc6:i386 on amd64-m-a system breaks partial upgrade ("just apt and dpkg") from bookworm to trixie)

Your message dated Thu, 17 Jul 2025 12:50:31 +0000
with message-id <E1ucO4F-004OeY-19@fasolo.debian.org>
and subject line Bug#1108193: fixed in glibc 2.41-10
has caused the Debian Bug report #1108193,
regarding apt: Ordering issue with libc6:i386 on amd64-m-a system breaks partial upgrade ("just apt and dpkg") from bookworm to trixie
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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-- 
1108193: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1108193
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: apt
Version: 2.6.1
Severity: important
X-Debbugs-Cc: debian-amd64@lists.debian.org, debian-release@lists.debian.org
User: debian-amd64@lists.debian.org
Usertags: amd64
User: debian-qa@lists.debian.org
Usertags: i386

Hi,

today I tried upgrading my "whatever" machine from bookworm to 
trixie. As old habits die hard, I tried a partial upgrade (apt 
install apt dpkg) before the full dist-upgrade. That was 
semi-catastrophic - as it ended with:

Unpacking libc6:amd64 (2.41-8) over (2.36-9+deb12u12) ...
dpkg: error processing package libc6:amd64 (--configure):
 package libc6:amd64 2.41-8 cannot be configured because libc6:i386 is at a different version (2.36-9+deb12u12)
Errors were encountered while processing:
 libc6:amd64

And then anything that I tried with apt upgrade / install 
--fix-broken did not help.


Attached is a reproducer using mmdebstrap. The package list is not 
exactly the same as on the original system, but it shows the same 
problem.

Best,
Chris


mmdebstrap \
    '--include=base-files,libc-l10n,libzstd1,init-system-helpers,openssh-sftp-server,libc-devtools,libc6-dev,libc-dev-bin,zlib1g-dev,zlib1g,locales-all,libsystemd-shared,libc6,libc6-dbg,openssh-server,openssh-client,libsystemd0,systemd,libstdc++6,libgmpxx4ldbl,libgmp-dev,libgmp10,man-db,libserf-1-1,libaprutil1-dbd-sqlite3,libaprutil1-ldap,liblua5.4-0,apache2-bin,apache2-data,apache2,apache2-utils,subversion,libsvn1,libpam-modules-bin,libpam-modules,libjack-jackd2-0,libbpf1,libz3-4,libbpfcc,bpftrace,libblkid1,libmount1,shared-mime-info,vlc-data,cmake-data,libc-ares2,nodejs,cmake,qrencode,libfdt1,libasound2-data,libsndio7.0,libsdl2-2.0-0,libsdl1.2debian,libflite1,emacs-el,emacs-common,emacs-bin-common,emacs-nox,neovim-runtime,libluajit-5.1-common,libluajit-5.1-2,neovim,libvterm0,lua-luv,ncurses-term,ncurses-base,libbrlapi0.8,qemu-utils,qemu-system-data,qemu-system-common,qemu-system-x86,libzvbi-common,libva-drm2,libva-x11-2,libva-wayland2,libva2,libsnappy1v5,libtheora0,libwebp7,libwebpmux3,libx264-164,libdvdnav4,libsndfile1,libopenmpt-modplug1,libsrt1.5-gnutls,libebml5,libgpg-error0,libgcrypt20,bash-completion,kmod,libkmod2,initramfs-tools-core,usrmerge,usr-is-merged,initramfs-tools,logsave,e2fsprogs,mc-data,findutils,mc,libtirpc-common,libtirpc-dev,lsof,libnsl2,libnsl-dev,libcrypt1,libcrypt-dev,libexpat1-dev,libexpat1,python3-minimal,libsqlite3-0,sqlite3,lua5.2,xorriso,libpython3-stdlib,libjs-sphinxdoc,python3-dev,libpython3-dev,libpython3-all-dev,python3-all-dev,python3-all,python3-venv,python3-setuptools,python3-pkg-resources,python3-yarl,python3-yaml,python3-tk,tk8.6-blt2.5,blt,python3-numpy,python-matplotlib-data,python3-matplotlib,python3-scipy,python3-pyrsistent,libwebpdemux2,python3-pil,python3-pil.imagetk,python3-peewee,python3-multidict,python3-markupsafe,python3-lz4,python3-lxml,python3-logbook,python3-libapparmor,python3-kiwisolver,python3-frozenlist,python3-brotli,python3-ufolib2,unicode-data,python3-fonttools,python3-dbus,python3-contourpy,python3-cffi-backend,libaudit-common,libaudit1,python3-audit,python3-argcomplete,gpg-wks-client,gpg,gpg-wks-server,gnupg-utils,gpg-agent,gpgsm,gpgconf,dirmngr,gnupg-l10n,gnupg,python3-apt,python3-aiohttp,iotop-c,iotop,python3-matrix-nio,weechat-matrix,libolm3,python3-olm,python3,python3-pycurl,weechat-core,weechat-python,aspell,libaspell15,weechat-plugins,weechat-curses,libstd-rust-dev,rustc,cargo,libxcb-keysyms1,libvlc-bin,vlc-bin,libqt5x11extras5,libxcb-icccm4,libxcb-xinput0,libqt5svg5,vlc-plugin-qt,vlc,vlc-plugin-video-output,libvlccore9,vlc-plugin-base,mutt,neomutt,podman,slirp4netns,fontconfig,libharfbuzz0b,libcairo-gobject2,libcairo2,fontconfig-config,libfontconfig1,libpangoft2-1.0-0,libpangocairo-1.0-0,libpango-1.0-0,rolo,libwacom9,libslirp0,libsecret-1-0,librsvg2-2,libgdk-pixbuf2.0-common,libgdk-pixbuf-2.0-0,liblqr-1-0,libcdt5,libcgraph6,libgvpr2,liblab-gamut1,libxmu6,libxaw7,graphviz,libltdl7,libpathplan4,libgvc6,libgudev-1.0-0,libcacard0,conmon,libclass-xsaccessor-perl,perl,libtext-iconv-perl,libtext-charwidth-perl,libterm-readkey-perl,libproc-processtable-perl,libparams-classify-perl,libnet-ssleay-perl,perl-base,liblocale-gettext-perl,libio-pty-perl,libio-interface-perl,libhtml-parser-perl,libdevel-callchecker-perl,libclone-perl,libb-hooks-op-check-perl,libapt-pkg-perl,irssi,libbabeltrace1,libdebuginfod-common,iproute2,exim4-daemon-light,exim4-base,exim4-config,apt,apt-utils,libsasl2-modules-db,libsasl2-2,curl,wget,tar,dpkg-dev,libdpkg-perl,sqop,libunbound8,librtmp1,lftp,libp11-kit0,git-man,git,znc-python,znc,tcpdump,socat,libuu0,slrn,rsync,python3-openssl,python3-cryptography,perl-openssl-defaults,pdns-recursor,openssl,mosh,libshout3,libsasl2-modules,librabbitmq4,libpq5,libk5crypto3,libkrb5-3,libkrb5support0,libgssapi-krb5-2,libfido2-1,dmsetup,libdevmapper1.02.1,libcryptsetup12,xfsprogs,bind9-dnsutils,bind9-host,bind9-libs,systemd-timesyncd,libpam-systemd,libc-bin,libgcc-s1,libacl1,bzip2,libbz2-1.0,libjte2,readline-common,libjemalloc2,libcap2,tmux,libncurses-dev,libncurses6,libncursesw6,libjpeg62-turbo,libyuv0,libaom3,libgav1-1,libpcre2-8-0,libselinux1,liblzma5,libxml2,libidn2-0,libtalloc2,libuuid1,libxapian30,libgssglue1,libidn12,libntlm0,libgsasl18,libcom-err2,libkeyutils1,sensible-utils,liblmdb0,libxxhash0,liblz4-1,libksba8,libsmartcols1,bsdextrautils,libuchardet0,groff-base,debconf-i18n,debconf-utils,debconf,libpipeline1,libseccomp2,pci.ids,coreutils,cpio,klibc-utils,libklibc,udev,libudev1,libfile-find-rule-perl,linux-base,libgpm2,libslang2,dpkg,media-types,netbase,tzdata,libffi-dev,libffi8,ca-certificates,python3-pip-whl,python3-setuptools-whl,python3-idna,libyaml-0-2,libtcl8.6,fonts-dejavu-core,libbrotli1,libfreetype6,xkb-data,libx11-6,libx11-xcb1,libxau6,libxdmcp6,libxcb1,libx11-data,libxrender1,libxft2,libxext6,debianutils,sysvinit-utils,x11-common,libxss1,libtk8.6,fonts-lyx,python3-dateutil,libgomp1,libimagequant0,liblcms2-2,libopenjp2-7,libfribidi0,libgraphite2-3,libraqm0,libdeflate0,libjbig0,liblerc4,libtiff6,python3-pyparsing,python3-cycler,libxslt1.1,python3-attr,python3-fs,python3-mpmath,python3-sympy,python3-packaging,libqhull-r8.0,libopenblas-pthread-dev,libgfortran5,libopenblas0-pthread,libopenblas0,libopenblas-dev,libblas3,liblapack3,python3-decorator,libapparmor1,dbus-session-bus-common,libcap-ng0,libpam0g,libpam-runtime,systemd-sysv,dbus-user-session,dbus-system-bus-common,dbus-bin,dbus,dbus-daemon,libdebconfclient0,base-passwd,libattr1,libmd-dev,libmd0,libbsd-dev,libbsd0,libsemanage-common,libsepol2,libsemanage2,passwd,adduser,libdbus-1-3,python-apt-common,distro-info-data,python3-async-timeout,python3-aiosignal,python3-cachetools,python3-aiofiles,python3-python-socks,python3-aiohttp-socks,python3-h11,python3-hpack,python3-h2,python3-jsonschema,python3-pycryptodome,python3-webcolors,python3-pygments,python3-binwalk,file,libmagic-mgc,python3-magic,python3-certifi,python3-charset-normalizer,python3-urllib3,python3-chardet,python3-requests,emacsen-common,dictionaries-common,libcjson1,libdrm-common,libdrm2,libdrm-amdgpu1,libpciaccess0,libdrm-intel1,libedit2,libsensors-config,libsensors5,libxcb-dri3-0,libxcb-present0,libxcb-randr0,libxcb-sync1,libxcb-xfixes0,libxshmfence1,libwayland-client0,libwayland-server0,libxcb-shm0,libegl-mesa0,libgbm1,libvulkan1,libgl1-mesa-dri,libproc2-0,procps,ucf,libjson-c5,libnghttp2-14,liberror-perl,pciutils,libpci3,libwrap0,libsnmp-base,dns-root-data,publicsuffix,libfstrm0,libsodium23,node-cjs-module-lexer,node-undici,libjansson4,libopus0,libsamplerate0,libmnl0,iptables,libip4tc2,libip6tc2,libnfnetlink0,libnetfilter-conntrack3,libnftnl11,libxtables12,libcap2-bin,debian-archive-keyring,cron,pinentry-curses,libyajl2,crun,containernetworking-plugins,golang-github-containers-image,golang-github-containers-common,libpixman-1-0,libxcb-render0,libthai-data,libdatrie1,libthai0,libunac1,libvc0,libnuma1,liburing2,libnl-genl-3-200,libnl-route-3-200,libnl-3-200,libibverbs1,libdecor-0-0,libasyncns0,libogg0,libvorbisfile3,libvorbisenc2,libvorbis0a,libmp3lame0,libpulse0,libwayland-cursor0,libwayland-egl1,libxfixes3,libxcursor1,libxi6,libxcb-xkb1,libxkbcommon-x11-0,libxkbcommon0,libxrandr2,install-info,libunibilium4,libitm1,libatomic1,libasan8,liblsan0,libcc1-0,libctf-nobfd0,libctf0,binutils-i686-linux-gnu,libgprofng0,libbinutils,binutils-common,binutils-x86-64-linux-gnu,binutils,g++-12,libstdc++-12-dev,libisl23,libmpfr6,libmpc3,gcc-12,cpp-12,libubsan1,libquadmath0,libgcc-12-dev,libtsan2,libgccjit0,gcc-12-base,libnspr4,libnss3,libpcsclite1,libusb-1.0-0,libdaxctl1,libndctl6,libpmem1,seabios,ipxe-qemu,libevdev2,libwacom-common,libsecret-common,libinput-bin,libinput10,libvdpau1,ocl-icd-libopencl1,libsoxr0,libgsm1,libshine3,libspeex1,libtwolame0,libxvidcore4,libvlc5,libaa1,libcaca0,libgl1,libxcb-glx0,libxxf86vm1,libglx-mesa0,libglx0,libgles2,libegl1,libglvnd0,libxcb-xv0,libdouble-conversion3,libpcre2-16-0,libice6,libmd4c0,libsm6,libxcb-util1,libxcb-image0,libxcb-render-util0,libxcb-shape0,libxcb-xinerama0,libdynaloader-functions-perl,libhtml-tagset-perl,liburi-perl,xz-utils,patch,make,libtasn1-6,libudfread0,libbluray2,libchromaprint1,libgme0,librist4,libzmq5,libmtp-common,libmysofa1,libass9,libavahi-client3,libavahi-common3,libavahi-common-data,libraw1394-11,libavc1394-0,libcddb2,libdc1394-25,libdvbpsi10,libfaad2,libkate1,liblua5.2-0,libmad0,libmatroska7,libmpcdec6,libresid-builder0c2a,libsidplay2,libspeexdsp1,libqrencode4,libsdl-image1.2,libde265-0,libheif1,libxpm4,libgd3,linux-libc-dev,libtinfo6,runit-helper,libargon2-1,libcanlock3,libpopt0,libutempter0,libhttp-parser2.9,g++,gcc,cpp,libinih1,libprotobuf-c1,libmaxminddb0,mount,bash,bsdutils,dash,diffutils,grep,gzip,hostname,login,ncurses-bin,sed,util-linux,util-linux-extra,postgresql-15,postgresql-client-15' \
    --chrooted-customize-hook='/usr/bin/dpkg --add-architecture i386 && apt update && apt install -y libc6:i386 libc6-dev:i386 libc6-dbg:i386 libssl3:i386 libkrb5-3:i386  && dpkg -l | grep :i386 && sed -e s/bookworm/trixie/ -i /etc/apt/sources.list && apt update && apt install -y apt dpkg ' bookworm /dev/null

--- End Message ---
--- Begin Message --- 
Source: glibc
Source-Version: 2.41-10
Done: Aurelien Jarno <aurel32@debian.org>

We believe that the bug you reported is fixed in the latest version of
glibc, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 1108193@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Aurelien Jarno <aurel32@debian.org> (supplier of updated glibc package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Thu, 17 Jul 2025 13:21:32 +0200
Source: glibc
Architecture: source
Version: 2.41-10
Distribution: unstable
Urgency: medium
Maintainer: GNU Libc Maintainers <debian-glibc@lists.debian.org>
Changed-By: Aurelien Jarno <aurel32@debian.org>
Closes: 1108193
Changes:
 glibc (2.41-10) unstable; urgency=medium
 .
   [ Samuel Thibault ]
   * debian/testsuite-xfail-debian.mk: Update xfails.
   * debian/patches/hurd-i386/local-pthread_once.diff: Pave the way for 2.42.
 .
   [ Helmut Grohne ]
   * Partially restore init restarting. (Closes: #1108193)
 .
   [ Aurelien Jarno ]
   * debian/patches/git-updates.diff: update from upstream stable branch:
     - Fix sparc32 Fix argument passing to __libc_start_main
     - Fix error reporting (false negatives) in SGID tests
Checksums-Sha1:
 7111f903c883eec85a51363d3db3fabdcd91c692 7544 glibc_2.41-10.dsc
 a5bdfe66ee44a366dc73da1912d9136141266756 436328 glibc_2.41-10.debian.tar.xz
 e59446c2c210f60759a49707ddc94e8db977e12b 9348 glibc_2.41-10_source.buildinfo
Checksums-Sha256:
 64f94c882849f49381718d4da1ccee72b87e5500c2d1d7f532de1d0bb28e01f1 7544 glibc_2.41-10.dsc
 9a92577a85bdb4804dee8fd2293b54d05aa5bc74cdb255ccdfdf5158b08e557a 436328 glibc_2.41-10.debian.tar.xz
 73ad8f2b5d31485d1b40ca91558768c59321b44c42ce1eb7e9764948fa5dc4ee 9348 glibc_2.41-10_source.buildinfo
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 e09e7572b33b3afa14bbc17ca1cb2a26 436328 libs required glibc_2.41-10.debian.tar.xz
 82a0f48cec435a537b23aaf123811b22 9348 libs required glibc_2.41-10_source.buildinfo

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--- End Message ---
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