Your message dated Tue, 5 Nov 2024 16:12:19 +0100 with message-id <is3ezrjtwr2d5gvxtgzzrfba7ozljlajlcxkamocfqi6u5vbdb@5pmavd4tgy3o> and subject line Re: Bug#1086712: apt internal error autoremove has destroyed something has caused the Debian Bug report #1086712, regarding apt internal error autoremove has destroyed something to be marked as done. This means that you claim that the problem has been dealt with. If this is not the case it is now your responsibility to reopen the Bug report if necessary, and/or fix the problem forthwith. (NB: If you are a system administrator and have no idea what this message is talking about, this may indicate a serious mail system misconfiguration somewhere. Please contact owner@bugs.debian.org immediately.) -- 1086712: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1086712 Debian Bug Tracking System Contact owner@bugs.debian.org with problems
--- Begin Message ---
- To: Debian Bug Tracking System <submit@bugs.debian.org>
- Subject: apt internal error autoremove has destroyed something
- From: roland <roland.schaffer@schaffer-se.at>
- Date: Mon, 04 Nov 2024 16:56:55 +0100
- Message-id: <[🔎] 173073581544.878672.8431929047537058069.reportbug@worf.sse.local>
Package: apt Version: 2.9.10 Severity: normal X-Debbugs-Cc: roland.schaffer@schaffer-se.at Dear Maintainer, *** Reporter, please consider answering these questions, where appropriate *** * What led up to the situation? apt full-upgrade * What exactly did you do (or not do) that was effective (or ineffective)? nothing, upgrade simply crashed * What was the outcome of this action? Hmm, es sieht so aus, als ob der AutoRemover etwas beschädigt hat, was wirklich nicht geschehen sollte. Bitte erstellen Sie einen Fehlerbericht über apt. Die folgenden Informationen helfen Ihnen vielleicht, die Situation zu lösen: Unsatisfied dependencies: linux-headers-6.6.9-amd64 : Hängt ab von: linux-image-6.6.9-amd64 (= 6.6.9-1+b1) ist aber nicht installierbar oder linux-image-6.6.9-amd64-unsigned (= 6.6.9-1+b1) soll aber nicht installiert werden Error: Interner Fehler, AutoRemover hat etwas beschädigt. * What outcome did you expect instead? to complete the upgrade -- Package-specific info: -- apt-config dump -- APT ""; APT::Architecture "amd64"; APT::Build-Essential ""; APT::Build-Essential:: "build-essential"; APT::Install-Recommends "true"; APT::Install-Suggests "0"; APT::Key ""; APT::Key::Assert-Pubkey-Algo ">=rsa2048,ed25519,ed448,nistp256,nistp384,nistp512,brainpoolP256r1,brainpoolP320r1,brainpoolP384r1,brainpoolP512r1,secp256k1"; APT::Key::Assert-Pubkey-Algo::Next ">=rsa2048,ed25519,ed448,nistp256,nistp384,nistp512"; APT::Key::Assert-Pubkey-Algo::Future ">=rsa3072,ed25519,ed448"; APT::Sandbox ""; APT::Sandbox::User "_apt"; APT::Authentication ""; APT::Authentication::TrustCDROM "true"; APT::NeverAutoRemove ""; APT::NeverAutoRemove:: "^firmware-linux.*"; APT::NeverAutoRemove:: "^linux-firmware$"; APT::NeverAutoRemove:: "^linux-image-[a-z0-9]*$"; APT::NeverAutoRemove:: "^linux-image-[a-z0-9]*-[a-z0-9]*$"; APT::VersionedKernelPackages ""; APT::VersionedKernelPackages:: "linux-.*"; APT::VersionedKernelPackages:: "kfreebsd-.*"; APT::VersionedKernelPackages:: "gnumach-.*"; APT::VersionedKernelPackages:: ".*-modules"; APT::VersionedKernelPackages:: ".*-kernel"; APT::Never-MarkAuto-Sections ""; APT::Never-MarkAuto-Sections:: "metapackages"; APT::Never-MarkAuto-Sections:: "tasks"; APT::Move-Autobit-Sections ""; APT::Move-Autobit-Sections:: "oldlibs"; APT::Periodic ""; APT::Periodic::Update-Package-Lists "1"; APT::Update ""; APT::Update::Post-Invoke-Success ""; APT::Update::Post-Invoke-Success:: "/usr/bin/test -e /usr/share/dbus-1/system-services/org.freedesktop.PackageKit.service && /usr/bin/test -S /var/run/dbus/system_bus_socket && /usr/bin/gdbus call --system --dest org.freedesktop.PackageKit --object-path /org/freedesktop/PackageKit --timeout 4 --method org.freedesktop.PackageKit.StateHasChanged cache-update > /dev/null; /bin/echo > /dev/null"; APT::Update::Post-Invoke-Success:: "if /usr/bin/test -w /var/cache/swcatalog -a -e /usr/bin/appstreamcli; then appstreamcli refresh --source=os > /dev/null || true; fi"; APT::Architectures ""; APT::Architectures:: "amd64"; APT::Architectures:: "i386"; APT::Compressor ""; APT::Compressor::. ""; APT::Compressor::.::Name "."; APT::Compressor::.::Extension ""; APT::Compressor::.::Binary ""; APT::Compressor::.::Cost "0"; APT::Compressor::zstd ""; APT::Compressor::zstd::Name "zstd"; APT::Compressor::zstd::Extension ".zst"; APT::Compressor::zstd::Binary "zstd"; APT::Compressor::zstd::Cost "60"; APT::Compressor::zstd::CompressArg ""; APT::Compressor::zstd::CompressArg:: "-19"; APT::Compressor::zstd::UncompressArg ""; APT::Compressor::zstd::UncompressArg:: "-d"; APT::Compressor::lz4 ""; APT::Compressor::lz4::Name "lz4"; APT::Compressor::lz4::Extension ".lz4"; APT::Compressor::lz4::Binary "lz4"; APT::Compressor::lz4::Cost "50"; APT::Compressor::lz4::CompressArg ""; APT::Compressor::lz4::CompressArg:: "-1"; APT::Compressor::lz4::UncompressArg ""; APT::Compressor::lz4::UncompressArg:: "-d"; APT::Compressor::gzip ""; APT::Compressor::gzip::Name "gzip"; APT::Compressor::gzip::Extension ".gz"; APT::Compressor::gzip::Binary "gzip"; APT::Compressor::gzip::Cost "100"; APT::Compressor::gzip::CompressArg ""; APT::Compressor::gzip::CompressArg:: "-6n"; APT::Compressor::gzip::UncompressArg ""; APT::Compressor::gzip::UncompressArg:: "-d"; APT::Compressor::xz ""; APT::Compressor::xz::Name "xz"; APT::Compressor::xz::Extension ".xz"; APT::Compressor::xz::Binary "xz"; APT::Compressor::xz::Cost "200"; APT::Compressor::xz::CompressArg ""; APT::Compressor::xz::CompressArg:: "-6"; APT::Compressor::xz::UncompressArg ""; APT::Compressor::xz::UncompressArg:: "-d"; APT::Compressor::bzip2 ""; APT::Compressor::bzip2::Name "bzip2"; APT::Compressor::bzip2::Extension ".bz2"; APT::Compressor::bzip2::Binary "bzip2"; APT::Compressor::bzip2::Cost "300"; APT::Compressor::bzip2::CompressArg ""; APT::Compressor::bzip2::CompressArg:: "-6"; APT::Compressor::bzip2::UncompressArg ""; APT::Compressor::bzip2::UncompressArg:: "-d"; APT::Compressor::lzma ""; APT::Compressor::lzma::Name "lzma"; APT::Compressor::lzma::Extension ".lzma"; APT::Compressor::lzma::Binary "xz"; APT::Compressor::lzma::Cost "400"; APT::Compressor::lzma::CompressArg ""; 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Acquire::Snapshots::URI::Override ""; Acquire::Snapshots::URI::Override::Label ""; Acquire::Snapshots::URI::Override::Label::Debian-Security "https://snapshot.debian.org/archive/debian-security/@SNAPSHOTID@/"; Acquire::Snapshots::URI::Host ""; Acquire::Snapshots::URI::Host::archive.ubuntu.com "https://snapshot.ubuntu.com/@PATH@/@SNAPSHOTID@/"; Acquire::Snapshots::URI::Host::deb.debian.org "https://snapshot.debian.org/archive/@PATH@/@SNAPSHOTID@/"; Acquire::Snapshots::URI::Host::.archive.ubuntu.com "https://snapshot.ubuntu.com/@PATH@/@SNAPSHOTID@/"; Acquire::Snapshots::URI::Host::security.ubuntu.com "https://snapshot.ubuntu.com/@PATH@/@SNAPSHOTID@/"; Acquire::Snapshots::URI::Host::ppa.launchpadcontent.net "https://snapshot.ppa.launchpadcontent.net/@PATH@/@SNAPSHOTID@/"; Acquire::Snapshots::URI::Host::ppa.launchpad.net "https://snapshot.ppa.launchpadcontent.net/@PATH@/@SNAPSHOTID@/"; Acquire::Languages ""; Acquire::Languages:: "en"; Acquire::Languages:: "none"; Acquire::Languages:: "de"; Acquire::CompressionTypes ""; Acquire::CompressionTypes::xz "xz"; Acquire::CompressionTypes::bz2 "bzip2"; Acquire::CompressionTypes::lzma "lzma"; Acquire::CompressionTypes::gz "gzip"; Acquire::CompressionTypes::lz4 "lz4"; Acquire::CompressionTypes::zst "zstd"; DPkg ""; DPkg::Path "/usr/sbin:/usr/bin:/sbin:/bin"; DPkg::Pre-Install-Pkgs ""; DPkg::Pre-Install-Pkgs:: "/usr/bin/apt-listchanges --apt || test $? -lt 10"; DPkg::Pre-Install-Pkgs:: "/usr/sbin/dpkg-preconfigure --apt || true"; DPkg::Tools ""; DPkg::Tools::Options ""; DPkg::Tools::Options::/usr/bin/apt-listchanges ""; DPkg::Tools::Options::/usr/bin/apt-listchanges::Version "2"; DPkg::Tools::Options::/usr/bin/apt-listchanges::InfoFD "20"; DPkg::Post-Invoke ""; DPkg::Post-Invoke:: "/usr/bin/test -e /usr/share/dbus-1/system-services/org.freedesktop.PackageKit.service && /usr/bin/test -S /var/run/dbus/system_bus_socket && /usr/bin/gdbus call --system --dest org.freedesktop.PackageKit --object-path /org/freedesktop/PackageKit --timeout 4 --method org.freedesktop.PackageKit.StateHasChanged cache-update > /dev/null; 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binary::apt::APT::Keep-Downloaded-Packages "0"; binary::apt::DPkg ""; binary::apt::DPkg::Progress-Fancy "1"; binary::apt::DPkg::Lock ""; binary::apt::DPkg::Lock::Timeout "-1"; binary::apt-cdrom ""; binary::apt-cdrom::APT ""; binary::apt-cdrom::APT::Internal ""; binary::apt-cdrom::APT::Internal::OpProgress ""; binary::apt-cdrom::APT::Internal::OpProgress::EraseLines "0"; apt-file ""; apt-file::Index-Names "deb"; apt-file::Parser ""; apt-file::Parser::Check-For-Description-Header "false"; Unattended-Upgrade ""; Unattended-Upgrade::Origins-Pattern ""; Unattended-Upgrade::Origins-Pattern:: "origin=Debian,codename=${distro_codename},label=Debian"; Unattended-Upgrade::Origins-Pattern:: "origin=Debian,codename=${distro_codename},label=Debian-Security"; Unattended-Upgrade::Origins-Pattern:: "origin=Debian,codename=${distro_codename}-security,label=Debian-Security"; CommandLine ""; CommandLine::AsString "apt-config dump"; -- (no /etc/apt/preferences present) -- -- (no /etc/apt/preferences.d/* present) -- -- /etc/apt/sources.list -- # # # RWH - geaendert von buster auf sid (unstable) # deb http://deb.debian.org/debian/ sid main non-free contrib non-free-firmware deb-src http://deb.debian.org/debian/ sid main non-free contrib non-free-firmware deb http://security.debian.org/debian-security sid/updates main contrib non-free deb-src http://security.debian.org/debian-security sid/updates main contrib non-free # updates #deb http://deb.debian.org/debian/ buster-updates main contrib non-free #deb-src http://deb.debian.org/debian/ buster-updates main contrib non-free #deb [arch=amd64] https://download.virtualbox.org/virtualbox/debian sid contrib non-free deb [arch=amd64 signed-by=/usr/share/keyrings/oracle-virtualbox-2016.gpg] https://download.virtualbox.org/virtualbox/debian bookworm contrib # This system was installed using small removable media # (e.g. netinst, live or single CD). The matching "deb cdrom" # entries were disabled at the end of the installation process. # For information about how to configure apt package sources, # see the sources.list(5) manual. deb http://http.us.debian.org/debian/ sid main contrib non-free # wine #deb https://dl.winehq.org/wine-builds/debian/ bullseye main #fortinet IPSec VPN # that sucks... #deb [arch=amd64] https://repo.fortinet.com/repo/6.4/ubuntu/ /bionic multiverse #deb [arch=amd64] https://repo.fortinet.com/repo/ubuntu/ /bionic multiverse # RWH # SOM Toolbox TU Wien # GEHT leider NICHT #deb http://olymp.ifs.tuwien.ac.at/apt stable main #IFS/Vienna University of Technology #deb [arch=amd64 signed-by=/usr/share/keyrings/repo.fortinet.com.gpg] https://repo.fortinet.com/repo/forticlient/7.4/ubuntu22/ stable non-free -- /etc/apt/sources.list.d/atomic.list -- deb https://updates.atomicorp.com/channels/atomic/debian sid main deb https://updates.atomicorp.com/channels/ossec/debian/pool/main/o/ossec-hids-agent sid main -- /etc/apt/sources.list.d/google-chrome.list -- ### THIS FILE IS AUTOMATICALLY CONFIGURED ### # You may comment out this entry, but any other modifications may be lost. deb [arch=amd64] http://dl.google.com/linux/chrome/deb/ stable main -- /etc/apt/sources.list.d/google-chrome.list.save -- ### THIS FILE IS AUTOMATICALLY CONFIGURED ### # You may comment out this entry, but any other modifications may be lost. deb [arch=amd64] http://dl.google.com/linux/chrome/deb/ stable main -- /etc/apt/sources.list.d/ifs-Vienna.list -- -- /etc/apt/sources.list.d/mono-official-stable.list -- deb https://download.mono-project.com/repo/debian stable-buster main -- /etc/apt/sources.list.d/openvpn3.list -- # OpenVPN 3 Linux client - Debian 11 deb https://swupdate.openvpn.net/community/openvpn3/repos bullseye main -- /etc/apt/sources.list.d/opera-stable.list -- # This file makes sure that Opera Browser is kept up-to-date # as part of regular system upgrades deb https://deb.opera.com/opera-stable/ stable non-free #Opera Browser (final releases) -- /etc/apt/sources.list.d/opera-stable.list.save -- # This file makes sure that Opera Browser is kept up-to-date # as part of regular system upgrades deb https://deb.opera.com/opera-stable/ stable non-free #Opera Browser (final releases) -- /etc/apt/sources.list.d/repo.fortinet.com.list -- deb [arch=amd64 signed-by=/usr/share/keyrings/repo.fortinet.com.gpg] https://repo.fortinet.com/repo/forticlient/7.4/ubuntu22/ stable non-free -- /etc/apt/sources.list.d/sid.list -- #deb http://deb.debian.org/debian sid main contrib non-free -- /etc/apt/sources.list.d/signal-xenial.list -- deb [arch=amd64 signed-by=/usr/share/keyrings/signal-desktop-keyring.gpg] https://updates.signal.org/desktop/apt xenial main -- /etc/apt/sources.list.d/skype-stable.list -- #deb [arch=amd64] https://repo.skype.com/deb stable main -- /etc/apt/sources.list.d/spotify.list -- deb http://repository.spotify.com stable non-free -- /etc/apt/sources.list.d/spotify.list.save -- deb http://repository.spotify.com stable non-free -- /etc/apt/sources.list.d/teams.list -- deb [arch=amd64] https://packages.microsoft.com/repos/ms-teams stable main -- /etc/apt/sources.list.d/teams.list.save -- ### THIS FILE IS AUTOMATICALLY CONFIGURED ### # You may comment out this entry, but any other modifications may be lost. deb [arch=amd64] https://packages.microsoft.com/repos/ms-teams stable main -- /etc/apt/sources.list.d/teamviewer.list -- ### TeamViewer DEB repository list ### NOTE: Manual changes to this file ### - prevent it from being updated by TeamViewer package updates ### - will be lost after using the 'teamviewer repo' command ### The original file can be restored with this command: ### cp /opt/teamviewer/tv_bin/script/teamviewer.list /etc/apt/sources.list.d/teamviewer.list ### which has the same effect as 'teamviewer repo default' ### NOTE: It is preferred to use the following commands to edit this file: ### teamviewer repo - show current repository configuration ### teamviewer repo default - restore default configuration ### teamviewer repo disable - disable the repository ### teamviewer repo stable - make all regular TeamViewer packages available (default) ### teamviewer repo preview - additionally, make feature preview packages available ### teamviewer repo development - additionally, make the latest development packages available deb [signed-by=/usr/share/keyrings/teamviewer-keyring.gpg] https://linux.teamviewer.com/deb stable main # deb [signed-by=/usr/share/keyrings/teamviewer-keyring.gpg] https://linux.teamviewer.com/deb preview main -- /etc/apt/sources.list.d/teamviewer.list.save -- ### TeamViewer DEB repository list ### NOTE: Manual changes to this file ### - prevent it from being updated by TeamViewer package updates ### - will be lost after using the 'teamviewer repo' command ### The original file can be restored with this command: ### cp /opt/teamviewer/tv_bin/script/teamviewer.list /etc/apt/sources.list.d/teamviewer.list ### which has the same effect as 'teamviewer repo default' ### NOTE: It is preferred to use the following commands to edit this file: ### teamviewer repo - show current repository configuration ### teamviewer repo default - restore default configuration ### teamviewer repo disable - disable the repository ### teamviewer repo stable - make all regular TeamViewer packages available (default) ### teamviewer repo preview - additionally, make feature preview packages available ### teamviewer repo development - additionally, make the latest development packages available deb https://linux.teamviewer.com/deb stable main # deb https://linux.teamviewer.com/deb preview main # deb https://linux.teamviewer.com/deb development main -- /etc/apt/sources.list.d/winehq-bookworm.sources -- Types: deb URIs: https://dl.winehq.org/wine-builds/debian Suites: bookworm Components: main Architectures: amd64 i386 Signed-By: /usr/share/keyrings/winehq-archive.key -- System Information: Debian Release: trixie/sid APT prefers unstable APT policy: (500, 'unstable') Architecture: amd64 (x86_64) Foreign Architectures: i386 Kernel: Linux 6.11.4-amd64 (SMP w/8 CPU threads; PREEMPT) Kernel taint flags: TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE Locale: LANG=de_AT.UTF-8, LC_CTYPE=de_AT.UTF-8 (charmap=UTF-8), LANGUAGE=de_AT:de Shell: /bin/sh linked to /usr/bin/dash Init: systemd (via /run/systemd/system) LSM: AppArmor: enabled Versions of packages apt depends on: ii adduser 3.137 ii base-passwd 3.6.5 ii debian-archive-keyring 2023.4 ii gpgv 2.2.45-2 ii libapt-pkg6.0t64 2.9.10 ii libc6 2.40-3 ii libgcc-s1 14.2.0-8 ii libgnutls30t64 3.8.6-2+b1 ii libseccomp2 2.5.5-1+b2 ii libstdc++6 14.2.0-8 ii libsystemd0 256.7-3 Versions of packages apt recommends: ii ca-certificates 20240203 Versions of packages apt suggests: pn apt-doc <none> ii aptitude 0.8.13-6.1 ii dpkg-dev 1.22.11 ii gnupg 2.2.45-2 ii powermgmt-base 1.37+nmu1 ii synaptic 0.91.3+b1 -- no debconf information
--- End Message ---
--- Begin Message ---
- To: roland <roland.schaffer@schaffer-se.at>, 1086712-done@bugs.debian.org
- Subject: Re: Bug#1086712: apt internal error autoremove has destroyed something
- From: David Kalnischkies <david@kalnischkies.de>
- Date: Tue, 5 Nov 2024 16:12:19 +0100
- Message-id: <is3ezrjtwr2d5gvxtgzzrfba7ozljlajlcxkamocfqi6u5vbdb@5pmavd4tgy3o>
- In-reply-to: <[🔎] 73bf7cf3-edbd-4572-86a8-95d0ace9193f@schaffer-se.at>
- References: <[🔎] 173073581544.878672.8431929047537058069.reportbug@worf.sse.local> <[🔎] 173073581544.878672.8431929047537058069.reportbug@worf.sse.local> <[🔎] 73bf7cf3-edbd-4572-86a8-95d0ace9193f@schaffer-se.at>
Am Tue, Nov 05, 2024 at 01:48:49PM +0100, schrieb Roland Schaffer: > Additional info: > > Machine doe not boot any more (Kernel 6.11.5) > > Machine does not boot any older kernel. > > Machine boots into rescue-mode of any kernel, but its all for nothing > > i have to install completely new […] > On 04.11.24 16:56, roland wrote: > > * What led up to the situation? > > apt full-upgrade > > > > * What exactly did you do (or not do) that was effective (or > > ineffective)? > > nothing, upgrade simply crashed > > > > * What was the outcome of this action? > > Hmm, es sieht so aus, als ob der AutoRemover etwas beschädigt hat, was > > wirklich nicht geschehen sollte. Bitte erstellen Sie einen Fehlerbericht > > über apt. You said the "upgrade crashed", but the message you provided just above is printed by apt BEFORE it does anything. Yes, the message says it broke something, but it means that it broke constraints for the solution apt was going to suggest to the user for confirmation: The future was broken and hence abandoned, but the present remained untouched ready to try anew to reach a (hopefully this time) [better] possible future. So, just running 'apt full-upgrade' and seeing that message can not lead to an unbootable system. What is far more likely is that your system was already unbootable due to an earlier failure/crash/interruption of the upgrades performed by dpkg (maybe instructed by apt, on behave of your request and confirmation) that you haven't mentioned and tried to recover from by running apt [again] ending with that failure. It is somewhat unfortunate that apt is not always capable of recovering from a 'broken' system state, but "recovering" means in these cases usually running into the same errors again you will have to manually fix (as especially in Debian unstable, those tend to be forgotten file overrides or failing maintainer scripts). > > Die folgenden Informationen helfen Ihnen vielleicht, die Situation zu lösen: > > > > Unsatisfied dependencies: > > linux-headers-6.6.9-amd64 : Hängt ab von: linux-image-6.6.9-amd64 (= > > 6.6.9-1+b1) ist aber nicht installierbar oder > > linux-image-6.6.9-amd64-unsigned (= > > 6.6.9-1+b1) soll aber nicht installiert werden > > Error: Interner Fehler, AutoRemover hat etwas beschädigt. Kernel 6.6.9-1 was uploaded to Debian unstable on 2024-01-02 according to PTS, so roughly a year ago. I am not surprised the associated packages are long gone from the archive. I am a bit more surprised its not gone from your system as well given apt does automatic kernel removals nowadays (which might very well be the cause of the error… its suspicious that headers want to be installed while the images are long gone). Somehow I get the impression you were trying to install an out-of-tree kernel module and that went sideways based on: | Kernel taint flags: TAINT_OOT_MODULE, TAINT_UNSIGNED_MODULE But that is a wild guess and not really important anyhow. To work on the brokenness the autoremover generated, we would need a lot more details. Our README file gives more info, but the gist is that at least the `/var/lib/dpkg/status` file would be handy to perhaps reproduce this. `/var/log/apt/history.log` and `/var/log/apt/term.log` could perhaps tell you what command previously failed that had you ending up with that state assuming apt was involved and not some "3rd-party install script". None of this fixes the problem that got you into this mess though. That would be another bugreport against whatever package(s) caused it. Given that you said you completely reinstalled all of this seems impossible to recover and hence impossible to work on. I am therefore closing this bug report as not actionable. If I misunderstood and you can provide additional details from this system feel free to reply with the details and reopen. Best regards David KalnischkiesAttachment: signature.asc
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