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Bug#950607: marked as done (ITP: bwa-mem2 -- the next version of the bwa-mem algorithm in bwa)

Your message dated Thu, 17 Apr 2025 08:10:10 +0000
with message-id <E1u5KK2-00HaUh-6B@fasolo.debian.org>
and subject line Bug#950607: fixed in bwa-mem2 2.2.1-1
has caused the Debian Bug report #950607,
regarding ITP: bwa-mem2 -- the next version of the bwa-mem algorithm in bwa
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
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-- 
950607: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=950607
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist

Subject: ITP: bwa-mem2 -- the next version of the bwa-mem algorithm in bwa
Package: wnpp
Owner: Michael R. Crusoe <michael.crusoe@gmail.com>
Severity: wishlist

* Package name    : bwa-mem2
  Version         : 2.0~pre2
  Upstream Author : , Vasimuddin Md, Sanchit Misra, Intel Corporation, Heng Li.
* URL             : https://github.com/bwa-mem2/bwa-mem2/
* License         : MIT
  Programming Lang: C
  Description     : the next version of the bwa-mem algorithm in bwa
 It produces alignment identical to bwa and is ~80% faster.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/bwa-mem2

--- End Message ---
--- Begin Message --- 
Source: bwa-mem2
Source-Version: 2.2.1-1
Done: Michael R. Crusoe <crusoe@debian.org>

We believe that the bug you reported is fixed in the latest version of
bwa-mem2, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 950607@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Michael R. Crusoe <crusoe@debian.org> (supplier of updated bwa-mem2 package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Thu, 18 Nov 2021 18:55:34 +0100
Source: bwa-mem2
Binary: bwa-mem2 bwa-mem2-dbgsym
Architecture: source amd64
Version: 2.2.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Michael R. Crusoe <crusoe@debian.org>
Description:
 bwa-mem2   - Sequence alignment using Burrows-Wheeler Transform
Closes: 950607
Changes:
 bwa-mem2 (2.2.1-1) unstable; urgency=medium
 .
   * Initial release. (Closes: #950607)
Checksums-Sha1:
 c6790cef5e307e6413c9cfc64136c90be8f71b30 2014 bwa-mem2_2.2.1-1.dsc
 de5a55bb0efe3fa7242752b7d466581f0078f4ac 230828 bwa-mem2_2.2.1.orig.tar.xz
 7980e0bc0fe26272dd9feb2f91af41a5e1abfbde 26796 bwa-mem2_2.2.1-1.debian.tar.xz
 c33ce5cbbe3a4b208bd45741b4a61884ce46cfd5 2017628 bwa-mem2-dbgsym_2.2.1-1_amd64.deb
 9de9beaaf15f7e017dfbfe1da96a4e1f71a4a002 6016 bwa-mem2_2.2.1-1_amd64.buildinfo
 1dec5842ec63fa4fe441f068a554c5583d482834 368164 bwa-mem2_2.2.1-1_amd64.deb
Checksums-Sha256:
 2253cac5f88618aae3360be49a87aee1f1df1d871af2c05cca03223a102a3d05 2014 bwa-mem2_2.2.1-1.dsc
 75c67d795f79fd3a3a42dd655aec3e6aee3ac231d46a5ae7214e2448df0ce450 230828 bwa-mem2_2.2.1.orig.tar.xz
 ba3e5b966151d9d1af0ab13a45949420f350d422e872eb6ccb0050fc1b167816 26796 bwa-mem2_2.2.1-1.debian.tar.xz
 9d3e5e72d5eafdc3e0e9b00537d85e6e7a8447445b2514b3d301e6e686963343 2017628 bwa-mem2-dbgsym_2.2.1-1_amd64.deb
 072b21784c3690cd19d42e862467c744367d7f53ed2cc8d7a9c7196be4e1414e 6016 bwa-mem2_2.2.1-1_amd64.buildinfo
 c1e90bec235378f4671fc69baea73e9d86552a8ae0e130b5aa265624fa42d81b 368164 bwa-mem2_2.2.1-1_amd64.deb
Files:
 1d1fbe042d20b1562f3b016456644e9f 2014 science optional bwa-mem2_2.2.1-1.dsc
 e68e6cd8575d8158539dbaed8ab4b6f2 230828 science optional bwa-mem2_2.2.1.orig.tar.xz
 64219192c0dcec9d2d5e6e7d3a823e71 26796 science optional bwa-mem2_2.2.1-1.debian.tar.xz
 9174765e37102edaf3cbf2659adeca38 2017628 debug optional bwa-mem2-dbgsym_2.2.1-1_amd64.deb
 0c31523b3c9e11e55085aa7621cc55bb 6016 science optional bwa-mem2_2.2.1-1_amd64.buildinfo
 7bb44ce1bb9d278eb47c063ed40d87d8 368164 science optional bwa-mem2_2.2.1-1_amd64.deb

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