Bug#1014210: marked as done (ITP: libslow5lib -- library for reading & writing SLOW5 files)
Your message dated Sat, 09 Jul 2022 18:00:15 +0000
with message-id <E1oAEkZ-0006Bb-Uo@fasolo.debian.org>
and subject line Bug#1014210: fixed in libslow5lib 0.5.1+dfsg-1
has caused the Debian Bug report #1014210,
regarding ITP: libslow5lib -- library for reading & writing SLOW5 files
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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1014210: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1014210
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--- Begin Message ---
Package: wnpp
Severity: wishlist
Subject: ITP: libslow5lib -- library for reading & writing SLOW5 files
Package: wnpp
Owner: Nilesh Patra <nilesh@debian.org>
Severity: wishlist
* Package name : libslow5lib
Version : 0.5.1
Upstream Author : Hasindu Gamaarachchi, Sasha Jenner, Hiruna Samarakoon
* URL : https://github.com/hasindu2008/slow5lib
* License : MIT
Programming Lang: C
Description : library for reading & writing SLOW5 files
Slow5lib is a software library for reading & writing SLOW5 files.
Slow5lib is designed to facilitate use of data in SLOW5 format by third-
party software packages. Existing packages that read/write data in FAST5
format can be easily modified to support SLOW5.
.
SLOW5 is a new file format for storing signal data from Oxford Nanopore
Technologies (ONT) devices. SLOW5 was developed to overcome inherent
limitations in the standard FAST5 signal data format that prevent
efficient, scalable analysis and cause many headaches for developers.
SLOW5 can be encoded in human-readable ASCII format, or a more compact
and efficient binary format (BLOW5) - this is analogous to the seminal
SAM/BAM format for storing DNA sequence alignments. The BLOW5 binary
format supports *zlib* (DEFLATE) compression, or other compression
methods, thereby minimising the data storage footprint while still
permitting efficient parallel access. Detailed benchmarking experiments
have shown that SLOW5 format is an order of magnitude faster and
significantly smaller than FAST5.
Remark: This package is maintained by Debian Med Packaging Team at
https://salsa.debian.org/med-team/libslow5lib
--- End Message ---
--- Begin Message ---
Source: libslow5lib
Source-Version: 0.5.1+dfsg-1
Done: Andreas Tille <tille@debian.org>
We believe that the bug you reported is fixed in the latest version of
libslow5lib, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 1014210@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated libslow5lib package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512
Format: 1.8
Date: Sat, 02 Jul 2022 13:39:22 +0530
Source: libslow5lib
Binary: libslow5-0 libslow5-0-dbgsym libslow5-dev python3-slow5 python3-slow5-dbgsym
Architecture: source amd64
Version: 0.5.1+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
libslow5-0 - library for reading & writing SLOW5 files
libslow5-dev - header and static library for reading & writing SLOW5 files
python3-slow5 - Python3 modul for reading & writing SLOW5 files
Closes: 1014210
Changes:
libslow5lib (0.5.1+dfsg-1) unstable; urgency=medium
.
* Initial release (Closes: #1014210)
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--- End Message ---
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