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Bug#1010931: marked as done (ITP: r-bioc-decoupler -- infer biological activities from omics data)



Your message dated Sat, 04 Jun 2022 19:00:15 +0000
with message-id <E1nxZ0R-000ByH-Ik@fasolo.debian.org>
and subject line Bug#1010931: fixed in r-bioc-decoupler 2.2.0+dfsg-1
has caused the Debian Bug report #1010931,
regarding ITP: r-bioc-decoupler -- infer biological activities from omics data
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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-- 
1010931: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=1010931
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist

Subject: ITP: r-bioc-decoupler -- infer biological activities from omics data
Package: wnpp
Owner: Andreas Tille <tille@debian.org>
Severity: wishlist

* Package name    : r-bioc-decoupler
  Version         : 2.2.0
  Upstream Author : Pau Badia-i-Mompel,
* URL             : https://bioconductor.org/packages/decoupleR/
* License         : GPL-3
  Programming Lang: GNU R
  Description     : infer biological activities from omics data
 Many methods allow one to extract biological activities from omics
 data using information from prior knowledge resources, reducing the
 dimensionality for increased statistical power and better interpretability.
 DecoupleR is a Bioconductor package containing different
 statistical methods to extract these signatures within a unified framework.
 decoupleR allows the user to flexibly test any method with any resource.
 It incorporates methods that take into account the sign and weight of
 network interactions. decoupleR can be used with any omic, as long as its
 features can be linked to a biological process based on prior knowledge.
 For example, in transcriptomics gene sets regulated by a transcription
 factor, or in phospho-proteomics phosphosites that are targeted by a kinase.

Remark: This package is maintained by Debian R Packages Maintainers at
   https://salsa.debian.org/r-pkg-team/r-bioc-decoupler

--- End Message ---
--- Begin Message ---
Source: r-bioc-decoupler
Source-Version: 2.2.0+dfsg-1
Done: Andreas Tille <tille@debian.org>

We believe that the bug you reported is fixed in the latest version of
r-bioc-decoupler, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 1010931@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated r-bioc-decoupler package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Fri, 13 May 2022 14:53:37 +0200
Source: r-bioc-decoupler
Binary: r-bioc-decoupler
Architecture: source all
Version: 2.2.0+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 r-bioc-decoupler - infer biological activities from omics data
Closes: 1010931
Changes:
 r-bioc-decoupler (2.2.0+dfsg-1) unstable; urgency=medium
 .
   * Initial release (closes: #1010931)
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 3632133992801684f97408f374130dc9e778af38 2780 r-bioc-decoupler_2.2.0+dfsg-1.debian.tar.xz
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