Bug#976789: marked as done (ITP: r-bioc-purecn -- copy number calling and SNV classification using targeted short read sequencing)
Your message dated Sun, 13 Dec 2020 21:00:23 +0000
with message-id <E1koYTf-0005mx-Fh@fasolo.debian.org>
and subject line Bug#976789: fixed in r-bioc-purecn 1.20.0+dfsg-1
has caused the Debian Bug report #976789,
regarding ITP: r-bioc-purecn -- copy number calling and SNV classification using targeted short read sequencing
to be marked as done.
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If this is not the case it is now your responsibility to reopen the
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976789: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=976789
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--- Begin Message ---
Package: wnpp
Severity: wishlist
Subject: ITP: r-bioc-purecn -- copy number calling and SNV classification using targeted short read sequencing
Package: wnpp
Owner: Steffen Moeller <moeller@debian.org>
Severity: wishlist
* Package name : r-bioc-purecn
Version : 1.20.0
Upstream Author : Markus Riester,
* URL : https://bioconductor.org/packages/PureCN/
* License : Artistic-2.0
Programming Lang: GNU R
Description : copy number calling and SNV classification using targeted short read sequencing
This package estimates tumor purity, copy number, and loss of
heterozygosity (LOH), and classifies single nucleotide variants (SNVs) by
somatic status and clonality. PureCN is designed for targeted short read
sequencing data, integrates well with standard somatic variant detection
and copy number pipelines, and has support for tumor samples without
matching normal samples.
Remark: This package is maintained by Debian R Packages Maintainers at
https://salsa.debian.org/r-pkg-team/r-bioc-purecn
--- End Message ---
--- Begin Message ---
Source: r-bioc-purecn
Source-Version: 1.20.0+dfsg-1
Done: Andreas Tille <tille@debian.org>
We believe that the bug you reported is fixed in the latest version of
r-bioc-purecn, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 976789@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated r-bioc-purecn package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Fri, 20 Nov 2020 20:40:17 +0100
Source: r-bioc-purecn
Binary: r-bioc-purecn
Architecture: source all
Version: 1.20.0+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Changed-By: Andreas Tille <tille@debian.org>
Description:
r-bioc-purecn - copy number calling and SNV classification using targeted short r
Closes: 976789
Changes:
r-bioc-purecn (1.20.0+dfsg-1) unstable; urgency=medium
.
* Initial release (closes: #976789)
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efe05daf43382d61f17ae922e6a2ae6a 5302436 gnu-r optional r-bioc-purecn_1.20.0+dfsg-1_all.deb
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