Bug#956246: ITP: r-bioc-tcgabiolinks -- GNU R/Bioconductor package for integrative analysis with GDC data
Package: wnpp
Severity: wishlist
Subject: ITP: r-bioc-tcgabiolinks -- GNU R/Bioconductor package for integrative analysis with GDC data
Package: wnpp
Owner: Andreas Tille <tille@debian.org>
Severity: wishlist
* Package name : r-bioc-tcgabiolinks
Version : 2.14.1
Upstream Author : Antonio Colaprico,
* URL : https://bioconductor.org/packages/TCGAbiolinks/
* License : GPL-3+
Programming Lang: GNU R
Description : GNU R/Bioconductor package for integrative analysis with GDC data
The aim of TCGAbiolinks is:
1) facilitate the GDC open-access data retrieval,
2) prepare the data using the appropriate pre-processing strategies,
3) provide the means to carry out different standard analyses and
4) to easily reproduce earlier research results.
In more detail, the package provides multiple methods for analysis (e.g.,
differential expression analysis, identifying differentially methylated
regions) and methods for visualization (e.g., survival plots, volcano plots,
starburst plots) in order to easily develop complete analysis pipelines.
Remark: This package is maintained by Debian R Packages Maintainers at
https://salsa.debian.org/r-pkg-team/r-bioc-tcgabiolinks
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