Bug#941964: ITP: idefix -- index checking for improved demultiplexing of NGS data
Package: wnpp
Severity: wishlist
Subject: ITP: idefix -- index checking for improved demultiplexing of NGS data
Package: wnpp
Owner: Andreas Tille <tille@debian.org>
Severity: wishlist
* Package name : idefix
Version : 1.3
Upstream Author : Oliver Drechsel <DrechselO@rki.de>,
* URL : https://gitlab.com/rki_bioinformatics/IDeFIX
* License : LGPL-3+
Programming Lang: Python
Description : index checking for improved demultiplexing of NGS data
IDeFIX is a tool for demultiplexing Illumina NGS data.
.
It reports inconsistencies between the raw data and the Sample Sheet,
checks for duplicates of indices/ index combinations in the latter and
removes unwanted characters from it. Apart from messages printed on the
terminal, IDeFIX creates an IDeFIX_Report.csv containing the indices/
index combinations from the raw data and their abundance as well as
their count in the Sample Sheet and the corresponding Index ID(s). This
file is stored in the project folder.
Remark: This package is maintained by Debian Med Packaging Team at
https://salsa.debian.org/med-team/idefix
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