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Bug#925527: marked as done (ITP: ragout -- Reference-Assisted Genome Ordering UTility)

Your message dated Fri, 02 Aug 2019 22:05:28 +0000
with message-id <E1htfg0-0004Ir-5l@fasolo.debian.org>
and subject line Bug#925527: fixed in ragout 2.1.1+dfsg-1
has caused the Debian Bug report #925527,
regarding ITP: ragout -- Reference-Assisted Genome Ordering UTility
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

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-- 
925527: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=925527
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist

Subject: ITP: ragout -- Reference-Assisted Genome Ordering UTility
Package: wnpp
Owner: Andreas Tille <tille@debian.org>
Severity: wishlist

* Package name    : ragout
  Version         : 2.1.1
  Upstream Author : Mikhail Kolmogorov and Joel Armstrong and
* URL             : https://github.com/fenderglass/Ragout/
* License         : BSD-3-clause
  Programming Lang: C
  Description     : Reference-Assisted Genome Ordering UTility
 Ragout (Reference-Assisted Genome Ordering UTility) is a tool for
 chromosome-level scaffolding using multiple references. Given initial
 assembly fragments (contigs/scaffolds) and one or multiple related
 references (complete or draft), it produces a chromosome-scale assembly
 (as a set of scaffolds).
 .
 The approach is based on the analysis of genome rearrangements (like
 inversions or chromosomal translocations) between the input genomes and
 reconstructing the most parsimonious structure of the target genome.
 .
 Ragout now supports both small and large genomes (of mammalian scale
 and complexity). The assembly of highly polymorphic genomes is
 currently limited.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/ragout

--- End Message ---
--- Begin Message --- 
Source: ragout
Source-Version: 2.1.1+dfsg-1

We believe that the bug you reported is fixed in the latest version of
ragout, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 925527@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated ragout package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Tue, 26 Mar 2019 12:47:54 +0100
Source: ragout
Binary: ragout ragout-examples
Architecture: source amd64 all
Version: 2.1.1+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 ragout     - Reference-Assisted Genome Ordering UTility
 ragout-examples - Reference-Assisted Genome Ordering UTility (example data)
Closes: 925527
Changes:
 ragout (2.1.1+dfsg-1) unstable; urgency=medium
 .
   * Initial release (Closes: #925527)
Checksums-Sha1:
 80b0e2ae64d3431704f65ef46d79096bc1ef9922 2094 ragout_2.1.1+dfsg-1.dsc
 2c99e361ed705e4e8ea03799ef736d57ebca23cc 10234988 ragout_2.1.1+dfsg.orig.tar.xz
 6e7cc39d522803392937477e85b808862c9ba265 7344 ragout_2.1.1+dfsg-1.debian.tar.xz
 9970e775618ead8cf63172a87950a56c2c32e2d6 1281058 ragout-dbgsym_2.1.1+dfsg-1_amd64.deb
 ae864369b34e76aaad82832fd2cd0c852074ffe0 18433286 ragout-examples_2.1.1+dfsg-1_all.deb
 94cd93f3ff696958454a3455b3eee6fa578d071e 7023 ragout_2.1.1+dfsg-1_amd64.buildinfo
 aa23a83295ea427c132966b9cec94a9184106658 103330 ragout_2.1.1+dfsg-1_amd64.deb
Checksums-Sha256:
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 a535835cccc602be1f85d4f46ecb13f168ca923cc478f22ea3734b19ac5001ac 10234988 ragout_2.1.1+dfsg.orig.tar.xz
 3e75b46f1bf2d6d775cb57ed02f61a472c4089feb52bf9319ce5a7e48d39e523 7344 ragout_2.1.1+dfsg-1.debian.tar.xz
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 a4c6c24dd5f3d1d601b07f97389ae453b2ac9a7505ba22575d25261fbc01c84f 7023 ragout_2.1.1+dfsg-1_amd64.buildinfo
 9191939b8059efea74d62397b3d83d44bc38123f071748c059c1786f72320c90 103330 ragout_2.1.1+dfsg-1_amd64.deb
Files:
 9e24dad753b4b2690ca303da11f2679b 2094 science optional ragout_2.1.1+dfsg-1.dsc
 a7984c704ab3a7a20f6c5852776df037 10234988 science optional ragout_2.1.1+dfsg.orig.tar.xz
 d9aba2e8b769d9f30a4d33cb402ddb46 7344 science optional ragout_2.1.1+dfsg-1.debian.tar.xz
 4f3d2a2d2feb7de50086cbe2ed883a2c 1281058 debug optional ragout-dbgsym_2.1.1+dfsg-1_amd64.deb
 28ab98df29ee6a5da7ba7ab9fb6aa121 18433286 science optional ragout-examples_2.1.1+dfsg-1_all.deb
 089523cf161daca4a5ef616b0350d51e 7023 science optional ragout_2.1.1+dfsg-1_amd64.buildinfo
 81b8a1533e398ae29b11abdb224881b8 103330 science optional ragout_2.1.1+dfsg-1_amd64.deb

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--- End Message ---
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