Bug#925527: ITP: ragout -- Reference-Assisted Genome Ordering UTility

[Andreas Tille <tille@debian.org>]

Package: wnpp
Severity: wishlist

Subject: ITP: ragout -- Reference-Assisted Genome Ordering UTility
Package: wnpp
Owner: Andreas Tille <tille@debian.org>
Severity: wishlist

* Package name    : ragout
  Version         : 2.1.1
  Upstream Author : Mikhail Kolmogorov and Joel Armstrong and
* URL             : https://github.com/fenderglass/Ragout/
* License         : BSD-3-clause
  Programming Lang: C
  Description     : Reference-Assisted Genome Ordering UTility
 Ragout (Reference-Assisted Genome Ordering UTility) is a tool for
 chromosome-level scaffolding using multiple references. Given initial
 assembly fragments (contigs/scaffolds) and one or multiple related
 references (complete or draft), it produces a chromosome-scale assembly
 (as a set of scaffolds).
 .
 The approach is based on the analysis of genome rearrangements (like
 inversions or chromosomal translocations) between the input genomes and
 reconstructing the most parsimonious structure of the target genome.
 .
 Ragout now supports both small and large genomes (of mammalian scale
 and complexity). The assembly of highly polymorphic genomes is
 currently limited.

Remark: This package is maintained by Debian Med Packaging Team at
   https://salsa.debian.org/med-team/ragout