Bug#913826: marked as done (ITP: presto -- high-throughput lymphocyte receptor sequences processing)
Your message dated Sun, 18 Nov 2018 19:03:52 +0000
with message-id <E1gOSMK-000IWr-8J@fasolo.debian.org>
and subject line Bug#913826: fixed in presto 0.5.10-1
has caused the Debian Bug report #913826,
regarding ITP: presto -- high-throughput lymphocyte receptor sequences processing
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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--
913826: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=913826
Debian Bug Tracking System
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--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller <moeller@debian.org>
* Package name : presto
Version : 0.5.2
* URL : https://pypi.org/project/presto/
* License : MIT
Programming Lang: Python
Description : high-throughput lymphocyte receptor sequences processing
pRESTO is a toolkit for processing raw reads from high-throughput
sequencing of B cell and T cell repertoires.
Dramatic improvements in high-throughput sequencing technologies now enable large-scale characterization of lymphocyte repertoires, defined as the collection of trans-membrane antigen-receptor proteins located on the surface of B cells and T cells. The REpertoire Sequencing TOolkit (pRESTO) is composed of a suite of utilities to handle all stages of sequence processing prior to germline segment assignment. pRESTO is designed to handle either single reads or paired-end reads. It includes features for quality control, primer masking, annotation of reads with sequence embedded barcodes, generation of unique molecular identifier (UMI) consensus sequences, assembly of paired-end reads and identification of duplicate sequences. Numerous options for sequence sorting, sampling and conversion operations are also included.
The package is about it appear on https://salsa.debian.org/python-team/modules/presto
--- End Message ---
--- Begin Message ---
Source: presto
Source-Version: 0.5.10-1
We believe that the bug you reported is fixed in the latest version of
presto, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 913826@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Steffen Moeller <moeller@debian.org> (supplier of updated presto package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Thu, 15 Nov 2018 18:09:18 +0100
Source: presto
Binary: python3-presto
Architecture: source all
Version: 0.5.10-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Python Modules Team <python-modules-team@lists.alioth.debian.org>
Changed-By: Steffen Moeller <moeller@debian.org>
Description:
python3-presto - toolkit for processing B and T cell sequences
Closes: 913826
Changes:
presto (0.5.10-1) unstable; urgency=medium
.
* Initial release (Closes: #913826)
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