[Date Prev][Date Next] [Thread Prev][Thread Next] [Date Index] [Thread Index]

Bug#899322: marked as done (ITP: trace2dbest -- bulk submission of chromatogram data to dbEST)



Your message dated Mon, 06 Aug 2018 14:10:39 +0000
with message-id <E1fmgDX-0007KN-BA@fasolo.debian.org>
and subject line Bug#899322: fixed in trace2dbest 3.0.1-1
has caused the Debian Bug report #899322,
regarding ITP: trace2dbest -- bulk submission of chromatogram data to dbEST
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
899322: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=899322
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Steffen Moeller <moeller@debian.org>

* Package name    : trace2dbest
  Version         : 3.0.1
* URL             : http://www.nematodes.org/bioinformatics/trace2dbEST/
* License         : GPL
  Programming Lang: Perl
  Description     : bulk submission of chromatogram data to dbEST

To appear on https://salsa.debian.org/med-team/trace2dbest

 ESTs are short sequences derived from reverse-transcribed RNA.
 Their abundances yield insights in the expression of genes across
 tissues, support the discovery of new genes and allow to assess
 the coverage of whole genome sequencing projects. Public databases
 like dbEST at the NCBI collect this data.
 .
 trace2dbEST process raw sequenceing chromatograph trace files from
 EST projects into quality-checked sequences, ready for submission to
 dbEST. trace2dbEST guides you through the creation of all the necessary
 files for submission of ESTs to dbEST. trace2dbest makes use of other
 software (available free under academic licence) that you will need to
 have installed, namely phred, cross_match and (optionaly) BLAST.

--- End Message ---
--- Begin Message ---
Source: trace2dbest
Source-Version: 3.0.1-1

We believe that the bug you reported is fixed in the latest version of
trace2dbest, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 899322@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Steffen Moeller <moeller@debian.org> (supplier of updated trace2dbest package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Tue, 22 May 2018 19:23:13 +0200
Source: trace2dbest
Binary: trace2dbest trace2dbest-doc
Architecture: source all
Version: 3.0.1-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Steffen Moeller <moeller@debian.org>
Description:
 trace2dbest - bulk submission of chromatogram data to dbEST
 trace2dbest-doc - Documentation and sample files for trace2dbest
Closes: 899322
Changes:
 trace2dbest (3.0.1-1) unstable; urgency=medium
 .
   * Initial release (closes: #899322)
Checksums-Sha1:
 efebca586cb282ad7914254e7964ca21bd889e97 2056 trace2dbest_3.0.1-1.dsc
 eeaba387281b90a6577a9b8de1bed9439baf511b 8025612 trace2dbest_3.0.1.orig.tar.gz
 1b0726a8d69be1cf24a358f9483536966caffc71 2460 trace2dbest_3.0.1-1.debian.tar.xz
 7751ffc64e73687e156605ef78423995352ca617 7916452 trace2dbest-doc_3.0.1-1_all.deb
 3dd7c4246ef558c13194b83c4a146e6b0c552db5 29432 trace2dbest_3.0.1-1_all.deb
 52b704829f5cf74b22ae4b7d317374eddeea89e1 6201 trace2dbest_3.0.1-1_amd64.buildinfo
Checksums-Sha256:
 5712ac69e2b964702fb59fb316247a3ae5898b476c48abcb1b0c18c15cfdb6b4 2056 trace2dbest_3.0.1-1.dsc
 7f23da85ef395df7daff57ea03d0b41cba00e9c777a934c33efb038a73b93b77 8025612 trace2dbest_3.0.1.orig.tar.gz
 0edca9003cb481f51b2d257eb163d13aae58796948161d6436ff606dcc7cbf37 2460 trace2dbest_3.0.1-1.debian.tar.xz
 77e9472bec2884d561fe0c5e4b5cd94dd4cc7154743eee69ccfe90168f86e017 7916452 trace2dbest-doc_3.0.1-1_all.deb
 bc5d8e0cd5e79b9ddd16d7baa39ee2668f7d112877725621ac3c987b436c091b 29432 trace2dbest_3.0.1-1_all.deb
 83851dbbcd8e039f27bf190e7a30856a34143c036e2d31ff130efee037deefa9 6201 trace2dbest_3.0.1-1_amd64.buildinfo
Files:
 efeda7d542bf1a070d8b0c9e56ed2587 2056 science optional trace2dbest_3.0.1-1.dsc
 11e0f98f8d8029d6362b8100db9bc5bd 8025612 science optional trace2dbest_3.0.1.orig.tar.gz
 eba3df6f902ba5b2d662d1d5b458a568 2460 science optional trace2dbest_3.0.1-1.debian.tar.xz
 e537df4785515c3a552f49e7d45f8d00 7916452 science optional trace2dbest-doc_3.0.1-1_all.deb
 5fd040b6881823c55f37ef3455d5c6a3 29432 science optional trace2dbest_3.0.1-1_all.deb
 0159ca9695ccf308654763766c087978 6201 science optional trace2dbest_3.0.1-1_amd64.buildinfo

-----BEGIN PGP SIGNATURE-----
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=oqCB
-----END PGP SIGNATURE-----

--- End Message ---

Reply to: