Bug#883322: marked as done (ITP: bitseq -- Bayesian Inference of Transcripts from Sequencing Data)
Your message dated Sat, 16 Dec 2017 23:00:11 +0000
with message-id <E1eQLRD-0000rn-1e@fasolo.debian.org>
and subject line Bug#883322: fixed in bitseq 0.7.5+dfsg-1
has caused the Debian Bug report #883322,
regarding ITP: bitseq -- Bayesian Inference of Transcripts from Sequencing Data
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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883322: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=883322
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--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille@debian.org>
* Package name : bitseq
Version : 0.7.5
Upstream Author : Peter Glaus <glaus@cs.man.ac.uk>
* URL : https://github.com/BitSeq/BitSeq
* License : Artistic
Programming Lang: C++
Description : Bayesian Inference of Transcripts from Sequencing Data
BitSeq is an application for inferring expression levels of individual
transcripts from sequencing (RNA-Seq) data and estimating differential
expression (DE) between conditions. An advantage of this approach is the
ability to account for both technical uncertainty and intrinsic biological
variance in order to avoid false DE calls. The technical contribution to the
uncertainty comes both from finite read-depth and the possibly ambiguous
mapping of reads to multiple transcripts.
Remark: This program was once provided by BioLinux. It is now maintained
by the Debian Med team at
https://anonscm.debian.org/git/debian-med/bitseq.git
--- End Message ---
--- Begin Message ---
Source: bitseq
Source-Version: 0.7.5+dfsg-1
We believe that the bug you reported is fixed in the latest version of
bitseq, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 883322@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated bitseq package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Sat, 02 Dec 2017 12:41:04 +0100
Source: bitseq
Binary: bitseq
Architecture: source amd64
Version: 0.7.5+dfsg-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
bitseq - Bayesian Inference of Transcripts from Sequencing Data
Closes: 883322
Changes:
bitseq (0.7.5+dfsg-1) unstable; urgency=medium
.
* Initial upload to Debian (Closes: #883322)
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