Bug#878962: marked as done (ITP: hinge -- long read genome assembler based on hinging)
Your message dated Tue, 12 Dec 2017 16:00:14 +0000
with message-id <E1eOmyc-00099O-JY@fasolo.debian.org>
and subject line Bug#878962: fixed in hinge 0.5.0-1
has caused the Debian Bug report #878962,
regarding ITP: hinge -- long read genome assembler based on hinging
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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878962: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=878962
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--- Begin Message ---
- To: Debian Bug Tracking System <submit@bugs.debian.org>
- Subject: ITP: hinge -- long read genome assembler based on hinging
- From: Afif Elghraoui <afif@debian.org>
- Date: Wed, 18 Oct 2017 00:31:56 -0400
- Message-id: <150830111675.22976.15776046480616091758.reportbug@workstation>
Package: wnpp
Severity: wishlist
Owner: Debian Med Team <debian-med-packaging@lists.alioth.debian.org>
* Package name : hinge
Version : 0.5
Upstream Author : Govinda Kamath,
Fei Xia,
Ilan Shomorony,
Thomas Courtade, and
David Tse
* URL : https://github.com/HingeAssembler/HINGE
* License : BSD
Programming Lang: C++, Python
Description : long read genome assembler based on hinging
HINGE is a genome assembler that seeks to achieve optimal repeat resolution
by distinguishing repeats that can be resolved given the data from those that
cannot. This is accomplished by adding “hinges” to reads for constructing an
overlap graph where only unresolvable repeats are merged. As a result, HINGE
combines the error resilience of overlap-based assemblers with
repeat-resolution capabilities of de Bruijn graph assemblers.
This will be maintained by the Debian Med team.
--- End Message ---
--- Begin Message ---
Source: hinge
Source-Version: 0.5.0-1
We believe that the bug you reported is fixed in the latest version of
hinge, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 878962@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Afif Elghraoui <afif@debian.org> (supplier of updated hinge package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Fri, 20 Oct 2017 00:27:38 -0400
Source: hinge
Binary: hinge
Architecture: source amd64
Version: 0.5.0-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Afif Elghraoui <afif@debian.org>
Description:
hinge - long read genome assembler based on hinging
Closes: 878962
Changes:
hinge (0.5.0-1) unstable; urgency=medium
.
* Initial release (Closes: #878962)
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