Bug#883322: ITP: bitseq -- Bayesian Inference of Transcripts from Sequencing Data
Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille@debian.org>
* Package name : bitseq
Version : 0.7.5
Upstream Author : Peter Glaus <glaus@cs.man.ac.uk>
* URL : https://github.com/BitSeq/BitSeq
* License : Artistic
Programming Lang: C++
Description : Bayesian Inference of Transcripts from Sequencing Data
BitSeq is an application for inferring expression levels of individual
transcripts from sequencing (RNA-Seq) data and estimating differential
expression (DE) between conditions. An advantage of this approach is the
ability to account for both technical uncertainty and intrinsic biological
variance in order to avoid false DE calls. The technical contribution to the
uncertainty comes both from finite read-depth and the possibly ambiguous
mapping of reads to multiple transcripts.
Remark: This program was once provided by BioLinux. It is now maintained
by the Debian Med team at
https://anonscm.debian.org/git/debian-med/bitseq.git
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