[Date Prev][Date Next] [Thread Prev][Thread Next] [Date Index] [Thread Index]

Bug#838856: marked as done (ITP: ruby-rgfa -- Ruby library for handling GFA files)



Your message dated Mon, 10 Oct 2016 17:00:10 +0000
with message-id <E1btdvu-0005vn-La@franck.debian.org>
and subject line Bug#838856: fixed in ruby-rgfa 1.3-1
has caused the Debian Bug report #838856,
regarding ITP: ruby-rgfa -- Ruby library for handling GFA files
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
838856: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=838856
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Sascha Steinbiss <satta@debian.org>

* Package name    : ruby-rgfa
  Version         : 1.2
  Upstream Author : Giorgio Gonnella <gonnella@zbh.uni-hamburg.de>
* URL             : https://github.com/ggonnella/rgfa
* License         : ISC
  Programming Lang: Ruby
  Description     : Ruby library for handling GFA files

The Graphical Fragment Assembly (GFA) format is a proposed file format
to describe the product of a genome sequence assembly process.
rgfa implements the proposed specifications for the GFA format
described under https://github.com/pmelsted/GFA-spec/blob/master/GFA-spec.md
as closely as possible.
The library allows one to create an RGFA object from a file in the GFA format
or from scratch, to enumerate the graph elements (segments, links,
containments, paths and header lines), to traverse the graph (by
traversing all links outgoing from or incoming to a segment), to search for
elements (e.g. which links connect two segments) and to manipulate the
graph (e.g. to eliminate a link or a segment or to duplicate a segment
distributing the read counts evenly on the copies).

--- End Message ---
--- Begin Message ---
Source: ruby-rgfa
Source-Version: 1.3-1

We believe that the bug you reported is fixed in the latest version of
ruby-rgfa, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 838856@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Sascha Steinbiss <satta@debian.org> (supplier of updated ruby-rgfa package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA512

Format: 1.8
Date: Fri, 07 Oct 2016 18:18:08 +0000
Source: ruby-rgfa
Binary: ruby-rgfa
Architecture: source all
Version: 1.3-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Sascha Steinbiss <satta@debian.org>
Description:
 ruby-rgfa  - parse, edit and write GFA format graphs in Ruby
Closes: 838856
Changes:
 ruby-rgfa (1.3-1) unstable; urgency=medium
 .
   * Initial release (Closes: #838856)
Checksums-Sha1:
 3600cb854bcfecfc5682329ceec10e7a12b36973 1970 ruby-rgfa_1.3-1.dsc
 eca5bd381e0bec584b2b48884c4b1eaa5f33c79c 56064 ruby-rgfa_1.3.orig.tar.xz
 cf634707194cb77b0d9565a0b85ea27858517b7f 10296 ruby-rgfa_1.3-1.debian.tar.xz
 823cf2cce217e299a98fc9b36f71f1c717757624 55762 ruby-rgfa_1.3-1_all.deb
Checksums-Sha256:
 aecb1d678a3a44de054ffb177c76f74c63fb256046aa4bd1cff2ad4d666a9c4f 1970 ruby-rgfa_1.3-1.dsc
 e69c0f2a08720ce2e90b9877065f8bef34ed16c748c05427395bc3623b0b24f7 56064 ruby-rgfa_1.3.orig.tar.xz
 ea73889087eaafe3cfa6deb545b48c59d03c629266996a6dc2126972011ece3f 10296 ruby-rgfa_1.3-1.debian.tar.xz
 4e61ae123e274433a2d09f3c1b091deac383eb559399426fa2e0c93db72f07c2 55762 ruby-rgfa_1.3-1_all.deb
Files:
 9923f94d7f8027f79d7815165956e99c 1970 science optional ruby-rgfa_1.3-1.dsc
 043ed2c33594fa848d5b741020ed24be 56064 science optional ruby-rgfa_1.3.orig.tar.xz
 ec00f1511e4d75ef3fe1a730850de138 10296 science optional ruby-rgfa_1.3-1.debian.tar.xz
 a394b731d06c89e7a01180bf1d949154 55762 science optional ruby-rgfa_1.3-1_all.deb

-----BEGIN PGP SIGNATURE-----
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=6D0k
-----END PGP SIGNATURE-----

--- End Message ---

Reply to: