[Date Prev][Date Next] [Thread Prev][Thread Next] [Date Index] [Thread Index]

Bug#832754: marked as done (ITP: adapterremoval -- rapid adapter trimming, identification, and read merging of gene sequences)

Your message dated Wed, 03 Aug 2016 22:00:13 +0000
with message-id <E1bV4Cz-0008Bo-GM@franck.debian.org>
and subject line Bug#832754: fixed in adapterremoval 2.1.7-1
has caused the Debian Bug report #832754,
regarding ITP: adapterremoval -- rapid adapter trimming, identification, and read merging of gene sequences
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
832754: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=832754
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille@debian.org>

* Package name    : adapterremoval
  Version         : 2.1.7
  Upstream Author : Mikkel Schubert, Stinus Lindgreen and Ludovic Orlando
* URL             : https://github.com/MikkelSchubert/adapterremoval
* License         : GPL
  Programming Lang: C++
  Description     : rapid adapter trimming, identification, and read merging of gene sequences
 This program searches for and removes remnant adapter sequences from High-
 Throughput Sequencing (HTS) data and (optionally) trims low quality
 bases from the 3' end of reads following adapter removal. AdapterRemoval
 can analyze both single end and paired end data, and can be used to
 merge overlapping paired-ended reads into (longer) consensus sequences.
 Additionally, the AdapterRemoval may be used to recover a consensus
 adapter sequence for paired-ended data, for which this information is
 not available.


Remark: This package is a precondition for the metabit pipeline and will
be maintained by the Debian Med team at
    https://anonscm.debian.org/git/debian-med/adapterremoval.git

--- End Message ---
--- Begin Message --- 
Source: adapterremoval
Source-Version: 2.1.7-1

We believe that the bug you reported is fixed in the latest version of
adapterremoval, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 832754@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated adapterremoval package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Thu, 28 Jul 2016 16:40:07 +0200
Source: adapterremoval
Binary: adapterremoval adapterremoval-examples
Architecture: source amd64 all
Version: 2.1.7-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 adapterremoval - rapid adapter trimming, identification, and read merging of gene
 adapterremoval-examples - rapid adapter trimming, identification, and read merging (example
Closes: 832754
Changes:
 adapterremoval (2.1.7-1) unstable; urgency=medium
 .
   * Initial release (Closes: #832754)
Checksums-Sha1:
 6494c0f863bd973205e9b6babc2169f931028057 2156 adapterremoval_2.1.7-1.dsc
 9d319ca80404772b12f7b1ade1100b7bbaf584c0 1629883 adapterremoval_2.1.7.orig.tar.gz
 2072883863335728870bb3caab324e99203df5bb 3928 adapterremoval_2.1.7-1.debian.tar.xz
 dc25169f2f2651c1b9b940e9a81c1915b1934a54 1601278 adapterremoval-dbgsym_2.1.7-1_amd64.deb
 41dd0332e40158ba81e42fdf9ecf7b56ef615410 376286 adapterremoval-examples_2.1.7-1_all.deb
 d27481c9dd2bee7ef82327f01dac10afe01a9cc2 185334 adapterremoval_2.1.7-1_amd64.deb
Checksums-Sha256:
 b51cad976afbf4c5cf2bfc71bf680def544087d1260a0ff40734ad888f4c5259 2156 adapterremoval_2.1.7-1.dsc
 4acda85051c4ac0f46b750d63094a21dbd9304c4f566a6b27ab4c390cdc57f52 1629883 adapterremoval_2.1.7.orig.tar.gz
 60a1eb633056af25853266f0f11ab036f1312004f5a01239fc16606364007883 3928 adapterremoval_2.1.7-1.debian.tar.xz
 3f19124aa17848810715844fb257b02512e76df754d4e4412dea379b3d0712e7 1601278 adapterremoval-dbgsym_2.1.7-1_amd64.deb
 7124dc62fd45a31253335b2dbbcb0fda227d1da59ea56e689fec5bcc0f9df80f 376286 adapterremoval-examples_2.1.7-1_all.deb
 f7ac14a7ce81ae26df8d326aeaace86d74c8d6a04f1c0326cbe1969ce7f47d7a 185334 adapterremoval_2.1.7-1_amd64.deb
Files:
 e3560d19533d1a25e0ad7d2cefaebe85 2156 science optional adapterremoval_2.1.7-1.dsc
 f506920a4c5f0af83ffaf70c7a049deb 1629883 science optional adapterremoval_2.1.7.orig.tar.gz
 eb5189756f005d48cb7263105d0685e5 3928 science optional adapterremoval_2.1.7-1.debian.tar.xz
 4ac4d5217562f9e594fb01fc8a1d94c5 1601278 debug extra adapterremoval-dbgsym_2.1.7-1_amd64.deb
 fcbec3cedaba188c81c96a3c6ccbad8c 376286 science optional adapterremoval-examples_2.1.7-1_all.deb
 efbc1bc54f519f174d246a222ff74a6e 185334 science optional adapterremoval_2.1.7-1_amd64.deb

-----BEGIN PGP SIGNATURE-----
Version: GnuPG v1
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=ITD8
-----END PGP SIGNATURE-----

--- End Message ---
Reply to: