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Bug#808495: marked as done (ITP: roary -- high speed stand alone pan genome pipeline)

Your message dated Fri, 05 Feb 2016 11:02:52 +0000
with message-id <E1aReA8-00017r-IW@franck.debian.org>
and subject line Bug#808495: fixed in roary 3.5.7+dfsg-1
has caused the Debian Bug report #808495,
regarding ITP: roary -- high speed stand alone pan genome pipeline
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
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misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
808495: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=808495
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist
Owner: Sascha Steinbiss <satta@tetrinetsucht.de>

* Package name    : roary
  Version         : 3.5.7
  Upstream Author : Andrew J. Page <roary@sanger.ac.uk>
* URL             : http://sanger-pathogens.github.io/Roary/
* License         : GPL-3+
  Programming Lang: Perl
  Description     : high speed stand alone pan genome pipeline

Roary is a high speed stand alone pan genome pipeline, which takes annotated
assemblies in GFF3 format (as produced, for instance, by Prokka) and calculates
the pan genome. Using a standard desktop PC, it can analyse datasets with
thousands of samples, something which is computationally infeasible with
existing methods, without compromising the quality of the results. 128 samples
can be analysed in under 1 hour using 1 GB of RAM and a single processor.
To perform this analysis using existing methods would take weeks and hundreds
of GB of RAM. Roary is not intended for meta-genomics or for comparing
extremely diverse sets of genomes.

This package will be maintained under the umbrella of the Debian Med
Packaging Team.

--- End Message ---
--- Begin Message --- 
Source: roary
Source-Version: 3.5.7+dfsg-1

We believe that the bug you reported is fixed in the latest version of
roary, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 808495@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Sascha Steinbiss <sascha@steinbiss.name> (supplier of updated roary package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Mon, 21 Dec 2015 22:54:28 +0000
Source: roary
Binary: roary
Architecture: source all
Version: 3.5.7+dfsg-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Sascha Steinbiss <sascha@steinbiss.name>
Description:
 roary      - high speed stand alone pan genome pipeline
Closes: 808495
Changes:
 roary (3.5.7+dfsg-1) unstable; urgency=low
 .
   * Initial release (Closes: #808495)
Checksums-Sha1:
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 39b852f215a05a43280bd77da1a58ba5e8aef530 456361 roary_3.5.7+dfsg.orig.tar.gz
 5d7d6b307dd2c1dc2594ff329344e6c5d37f34d1 3204 roary_3.5.7+dfsg-1.debian.tar.xz
 aa8a9e6f4da0965f1f50d0f5c05bb701b7890aa9 163768 roary_3.5.7+dfsg-1_all.deb
Checksums-Sha256:
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 8635dbd5c5e4d8595f5142c8b398c879c230280bcd3c20f2d5a01e5b884073b8 163768 roary_3.5.7+dfsg-1_all.deb
Files:
 7acce10d1f8af50e7f2fc64c9fc77321 2464 science optional roary_3.5.7+dfsg-1.dsc
 50062cc7a3ae619eae0aaf8cc87f827c 456361 science optional roary_3.5.7+dfsg.orig.tar.gz
 45d5afa2004633abe03b4958be7a39f2 3204 science optional roary_3.5.7+dfsg-1.debian.tar.xz
 6a34b1d806a55f4c95e5e6cb12abd952 163768 science optional roary_3.5.7+dfsg-1_all.deb

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