Bug#782969: marked as done (ITP: libmems -- library to support DNA string matching and comparative genomics)
Your message dated Wed, 22 Apr 2015 07:00:06 +0000
with message-id <E1Ykodi-0008Hz-RL@franck.debian.org>
and subject line Bug#782969: fixed in libmems 1.6.0+4725-1
has caused the Debian Bug report #782969,
regarding ITP: libmems -- library to support DNA string matching and comparative genomics
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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782969: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=782969
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--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille@debian.org>
* Package name : libmems
Version : 1.6
Upstream Author : Aaron Darling <darling@cs.wisc.edu>
* URL : http://sourceforge.net/p/mauve/code/HEAD/tree/libMems/trunk/
* License : GPL
Programming Lang: C++
Description : library to support DNA string matching and comparative genomics
libMems is a freely available software development library to support DNA
string matching and comparative genomics. Among other things, libMems
implements an algorithm to perform approximate multi-MUM and multi-MEM
identification. The algorithm uses spaced seed patterns in conjunction
with a seed-and-extend style hashing method to identify matches. The method
is efficient, requiring a maximum of only 16 bytes per base of the largest
input sequence, and this data can be stored externally (i.e. on disk) to
further reduce memory requirements.
Remark; This library is packaged by the Debian Med team as a
precondition of the Mauve multiple genome alignment package at
git://anonscm.debian.org/debian-med/libmems.git
--- End Message ---
--- Begin Message ---
Source: libmems
Source-Version: 1.6.0+4725-1
We believe that the bug you reported is fixed in the latest version of
libmems, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 782969@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated libmems package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256
Format: 1.8
Date: Fri, 17 Apr 2015 15:38:22 +0200
Source: libmems
Binary: libmems-1.6-dev libmems-1.6-1
Architecture: source amd64
Version: 1.6.0+4725-1
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
libmems-1.6-1 - library to support DNA string matching and comparative genomics
libmems-1.6-dev - development library to support DNA string matching and comparativ
Closes: 782969
Changes:
libmems (1.6.0+4725-1) unstable; urgency=medium
.
* Initial upload (Closes: #782969)
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