Bug#769641: ITP: barrnap -- rapid ribosomal RNA prediction

[Sascha Steinbiss <satta@tetrinetsucht.de>]

Package: wnpp
Severity: wishlist
Owner: Sascha Steinbiss <sascha@steinbiss.name>

* Package name    : barrnap
  Version         : 0.5 
  Upstream Author : Torsten Seemann <torsten.seemann@monash.edu>
* URL             : http://www.vicbioinformatics.com/software.barrnap.shtml
* License         : GPL
  Programming Lang: Perl
  Description     : rapid ribosomal RNA prediction

Barrnap (BAsic Rapid Ribosomal RNA Predictor) predicts the location of
ribosomal RNA genes in genomes. It supports bacteria (5S,23S,16S), archaea
(5S,5.8S,23S,16S), mitochondria (12S,16S) and eukaryotes (5S,5.8S,28S,18S).
It takes FASTA DNA sequence as input, and writes GFF3 as output. It uses the
NHMMER tool that comes with HMMER 3.1 for HMM searching in RNA:DNA style.
Multithreading is supported and one can expect roughly linear speed-ups
with more CPUs.