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Bug#744996: marked as done (ITP: varscan -- variant detection in next-generation sequencing data)

Your message dated Thu, 03 Jul 2014 13:00:07 +0000
with message-id <E1X2gcR-0004w5-LB@franck.debian.org>
and subject line Bug#744996: fixed in varscan 2.3.6+dfsg-1
has caused the Debian Bug report #744996,
regarding ITP: varscan -- variant detection in next-generation sequencing data
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
744996: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=744996
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille@debian.org>

* Package name    : varscan
  Version         : 2.3.6
  Upstream Author : Dan Koboldt
* URL             : http://varscan.sourceforge.net/
* License         : NPOSL-3.0
  Programming Lang: Java
  Description     : variant detection in next-generation sequencing data
 Variant detection in massively parallel sequencing. For one sample,
 calls SNPs, indels, and consensus genotypes. For tumor-normal pairs,
 further classifies each variant as Germline, Somatic, or LOH, and also
 detects somatic copy number changes.


This package is maintained by the Debian Med team at
 git://anonscm.debian.org/debian-med/varscan.git

--- End Message ---
--- Begin Message --- 
Source: varscan
Source-Version: 2.3.6+dfsg-1

We believe that the bug you reported is fixed in the latest version of
varscan, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 744996@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated varscan package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Tue, 15 Apr 2014 13:38:37 +0200
Source: varscan
Binary: varscan
Architecture: source amd64
Version: 2.3.6+dfsg-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
 varscan    - variant detection in next-generation sequencing data
Closes: 744996
Changes:
 varscan (2.3.6+dfsg-1) unstable; urgency=low
 .
   * Initial release (Closes: #744996)
Checksums-Sha1:
 06ef8693a46f6fd7283af785cf81d367c9f199d2 1979 varscan_2.3.6+dfsg-1.dsc
 f0a28d17c1046d6ea1b9db2bb6a75a1fe6bf90a7 44516 varscan_2.3.6+dfsg.orig.tar.xz
 9e2d0260cf2482659fbb847a91245c384857e4fe 18532 varscan_2.3.6+dfsg-1.debian.tar.xz
 764deba5f3cad0c9a1fc0ea455009c322922beb3 127136 varscan_2.3.6+dfsg-1_amd64.deb
Checksums-Sha256:
 6c566c0af7b3dd8f33b375190911485e1d51c18bfaaad2515070a97689948b8e 1979 varscan_2.3.6+dfsg-1.dsc
 e7b54dc777e3ce4e635227d666d6df25726ea5788c023ec10c097a5c3d3b463a 44516 varscan_2.3.6+dfsg.orig.tar.xz
 22603999756df1d70642af24021ca9895fe5bd53586007497f77504cb425af67 18532 varscan_2.3.6+dfsg-1.debian.tar.xz
 32db9f1bbe77ec916101f54182ec0798d37ea6743b399a32726faf1f675c95be 127136 varscan_2.3.6+dfsg-1_amd64.deb
Files:
 ed776e54abdb025576bf161220d83356 127136 non-free/science optional varscan_2.3.6+dfsg-1_amd64.deb
 efa3a869e0d81cb47e063124520acfc6 1979 non-free/science optional varscan_2.3.6+dfsg-1.dsc
 03c6b81bcfc4a61cd4c8c153612c271f 44516 non-free/science optional varscan_2.3.6+dfsg.orig.tar.xz
 687f58f59f2224b8c1cfba28ecc6e00a 18532 non-free/science optional varscan_2.3.6+dfsg-1.debian.tar.xz

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