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Bug#735180: marked as done (ITP: snp-sites -- Find snp sites from multi fasta alignment files)



Your message dated Wed, 15 Jan 2014 19:00:06 +0000
with message-id <E1W3Vh8-0006n0-Di@franck.debian.org>
and subject line Bug#735180: fixed in snp-sites 1.3-1
has caused the Debian Bug report #735180,
regarding ITP: snp-sites -- Find snp sites from multi fasta alignment files
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
735180: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=735180
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Jorge Soares <j.s.soares@gmail.com>

* Package name    : snp-sites
  Version         : 1.1
  Upstream Author : Andrew Page <ap13@sanger.ac.uk?
* URL             : https://github.com/sanger-pathogens/snp_sites
* License         : (GPL, MIT)
  Programming Lang: (C++)
  Description     : Find snp sites from multi fasta alignment files

(This application takes in a multi fasta alignment, finds all the SNP sites, then outputs the SNP sites in the following formats:
a multi fasta alignment, VCF, relaxed phylip format.)

--- End Message ---
--- Begin Message ---
Source: snp-sites
Source-Version: 1.3-1

We believe that the bug you reported is fixed in the latest version of
snp-sites, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 735180@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Jorge Soares <j.s.soares@gmail.com> (supplier of updated snp-sites package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Format: 1.8
Date: Fri, 10 Jan 2014 15:55:19 +0000
Source: snp-sites
Binary: snp-sites libsnp-sites1 libsnp-sites1-dev
Architecture: source amd64
Version: 1.3-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Jorge Soares <j.s.soares@gmail.com>
Description: 
 libsnp-sites1 - Shared libraries of the package snp-sites
 libsnp-sites1-dev - Static libraries and header files for the package snp-sites
 snp-sites  - Binary code for the package snp-sites
Closes: 735180
Changes: 
 snp-sites (1.3-1) unstable; urgency=low
 .
   * Initial release (Closes: #735180)
Checksums-Sha1: 
 5d8353e8022a81942ce2cd5aee0dc5de55c49a51 1517 snp-sites_1.3-1.dsc
 cda083b9ff729ddc5243a11d0f3ac99f0aa807ac 41779 snp-sites_1.3.orig.tar.gz
 87e868a8eb6f378828cea51364131ec9080c48db 3370 snp-sites_1.3-1.debian.tar.gz
 5157f972491f54e32c716187d6d70ba98aba9456 6930 snp-sites_1.3-1_amd64.deb
 cdf4a07d0b41a0282de9c686ae2820457bbce881 10720 libsnp-sites1_1.3-1_amd64.deb
 d3ed87abd9df38b2809ad89681ab247459631896 14352 libsnp-sites1-dev_1.3-1_amd64.deb
Checksums-Sha256: 
 b24f3912396b4e38dcdbf454da6edbe31ab96f10d3c08e3cc2ba0e8c11de9a19 1517 snp-sites_1.3-1.dsc
 034cc9cc01784d08a6b34b70b95be8e353ec015e3797f5178dd90f6823f74066 41779 snp-sites_1.3.orig.tar.gz
 a83923813c1427b47f1c93389785ce7bfb7cd5abf594490636f1fa96d88f87df 3370 snp-sites_1.3-1.debian.tar.gz
 740eac980039bb105c065845de00ded7f72f51f9f5d099fa44b5e322eb59bd2e 6930 snp-sites_1.3-1_amd64.deb
 33dd851ffad1936832ee1e311020e0c0f5dfb0b35e516ab425950a3854f5afe8 10720 libsnp-sites1_1.3-1_amd64.deb
 dd06647d3ae3ec4e7344e97abecfe162cb7b78236c472bb6bd12b929fe75694e 14352 libsnp-sites1-dev_1.3-1_amd64.deb
Files: 
 867be2eb7868e8ee07497ede861e8bdc 1517 science optional snp-sites_1.3-1.dsc
 984c48b991fe1051c50f1b6206422082 41779 science optional snp-sites_1.3.orig.tar.gz
 1f99b71556360dc412934f9d882cf767 3370 science optional snp-sites_1.3-1.debian.tar.gz
 ee398cb934c1d557d956981ef71bebe2 6930 science optional snp-sites_1.3-1_amd64.deb
 7d00330d036f1cbcf26a6ce12a8c2e33 10720 libs optional libsnp-sites1_1.3-1_amd64.deb
 4474dd7546a523dfc9e45d108100116d 14352 libdevel optional libsnp-sites1-dev_1.3-1_amd64.deb

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--- End Message ---

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