Bug#734638: marked as done (ITP: anfo -- Short Read Aligner/Mapper from MPG)
Your message dated Thu, 09 Jan 2014 22:00:05 +0000
with message-id <E1W1Ne1-0002hY-JY@franck.debian.org>
and subject line Bug#734638: fixed in anfo 0.98-3
has caused the Debian Bug report #734638,
regarding ITP: anfo -- Short Read Aligner/Mapper from MPG
to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)
--
734638: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=734638
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message ---
Package: wnpp
Severity: wishlist
Owner: Andreas Tille <tille@debian.org>
* Package name : anfo
Version : 0.98
Upstream Author : Udo Stenzel <udo_stenzel@eva.mpg.de>
* URL : https://bioinf.eva.mpg.de/anfo/
* License : GPLv3
Programming Lang: C++
Description : Short Read Aligner/Mapper from MPG
Anfo is a mapper in the spirit of Soap/Maq/Bowtie, but its implementation takes
more after BLAST/BLAT. It's most useful for the alignment of sequencing reads
where the DNA sequence is somehow modified (think ancient DNA or bisulphite
treatment) and/or there is more divergence between sample and reference than
what fast mappers will handle gracefully (say the reference genome is missing
and a related species is used instead).
This package was build for Debian since it is part of BioLinux and the Debian
Med team tries to package all software used in this Ubuntu derivative straight
into Debian. You can find the finished packaging in VCS at
svn://anonscm.debian.org/debian-med/trunk/packages/anfo/trunk/
--- End Message ---
--- Begin Message ---
Source: anfo
Source-Version: 0.98-3
We believe that the bug you reported is fixed in the latest version of
anfo, which is due to be installed in the Debian FTP archive.
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to 734638@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Andreas Tille <tille@debian.org> (supplier of updated anfo package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@ftp-master.debian.org)
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.8
Date: Wed, 08 Jan 2014 19:23:24 +0100
Source: anfo
Binary: anfo libanfo0 libanfo0-dev
Architecture: source amd64
Version: 0.98-3
Distribution: unstable
Urgency: medium
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Andreas Tille <tille@debian.org>
Description:
anfo - Short Read Aligner/Mapper from MPG
libanfo0 - Library for Short Read Aligner/Mapper from MPG
libanfo0-dev - Development files for Short Read Aligner/Mapper from MPG
Closes: 734638
Changes:
anfo (0.98-3) unstable; urgency=medium
.
[ Andreas Tille ]
* Initial upload to Debian (Closes: #734638)
* fixed watch file
* debian/control:
- cme fix dpkg-control
- Priority: optional
- debhelper 9
- canonical Vcs fields
* debian/copyright: DEP5
* use autoreconf (including necessary patches)
* Create additional library packages
* debian/anfo.1: Check out manpage from upstream git
repository
* debian/upstream: Add link to upstream repository
.
[ Gert Wollny ]
* debian/patches/*: Patches to build with latest gcc
Checksums-Sha1:
16033e992e0db8b48ac96672159f171188038b9c 1509 anfo_0.98-3.dsc
df0dc3bd6ac455e86cf66628434ac1587336c14c 462359 anfo_0.98.orig.tar.gz
0db6f6aaa48aa4f4e52248625c175c3272b51f38 7240 anfo_0.98-3.debian.tar.gz
3a2b2c8275a22810c7c598abfee5eae9bc2143fc 114340 anfo_0.98-3_amd64.deb
ed5949e9f8cf57a64961daa31dc8cae3dc3d9028 270020 libanfo0_0.98-3_amd64.deb
fab4f41bb419d4585fa1c70a232c7d5ab5103408 314840 libanfo0-dev_0.98-3_amd64.deb
Checksums-Sha256:
8e7f298f7bb3581f196faeafe47214224b80e7f823a06abdb765755b2c15ba87 1509 anfo_0.98-3.dsc
fdd7bfb6467872f4b9f3a3a19310f73154345689751fd965b1f4418ee0f740e7 462359 anfo_0.98.orig.tar.gz
ec20d89ed6e77c78825874007520d8288cfee026a2ad9379ce897f59cc80767e 7240 anfo_0.98-3.debian.tar.gz
9e238af688a10dd16364242f108248aa9e917296d2b1a384c2c767c70ca04d74 114340 anfo_0.98-3_amd64.deb
5e935bfefe4233ddf16a00af72dc456d55d744b76e2e0e1c4da512266bfa8e2b 270020 libanfo0_0.98-3_amd64.deb
c100faa7dfadfea06871197cdf720281daa5c6f034da8ad6b243d6cf32800c59 314840 libanfo0-dev_0.98-3_amd64.deb
Files:
df05c880721f2d60eadf065ad862f1c4 1509 science optional anfo_0.98-3.dsc
17398d931375f0be94cf5543739733b8 462359 science optional anfo_0.98.orig.tar.gz
b7187f3e49e40ce9a10345082824839c 7240 science optional anfo_0.98-3.debian.tar.gz
285faac33ee8a923ecf5a0fb47a26f13 114340 science optional anfo_0.98-3_amd64.deb
fbeee7906110c23e7836c652304aa9e6 270020 libs optional libanfo0_0.98-3_amd64.deb
671c74bb63decab4fd535a33fb76dc31 314840 libdevel optional libanfo0-dev_0.98-3_amd64.deb
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v1.4.15 (GNU/Linux)
iEYEARECAAYFAlLOoMUACgkQYDBbMcCf01pN4wCePPgQkMGcLKk+WEY9tOZU7/Gj
DXkAoKaDtrJ8BO9K8F+7iDt2rbWzxf3j
=gxtz
-----END PGP SIGNATURE-----
--- End Message ---
Reply to: