Bug#725128: ITP: rate4site -- detector of conserved amino-acid sites
Package: wnpp
Severity: wishlist
Owner: Guy Yachdav <gyachdav@rostlab.org>
* Package name : rate4site
Version : 3.0.0
Upstream Author : Nir Ben-Tal <NirB@tauex.tau.ac.il>
* URL : http://www.tau.ac.il/~itaymay/cp/rate4site.html
* License : GPL-3+
Programming Lang: C++
Description : detector of conserved amino-acid sites
Rate4Site calculates the relative evolutionary rate at each site using a
probabilistic-based evolutionary model.
This allows taking into account the stochastic process underlying sequence
evolution within protein families
and the phylogenetic tree of the proteins in the family.
The conservation score at a site corresponds to the site's evolutionary rate.
Reply to: