Bug#684039: ITP: prime-phylo -- Bayesian estimation of gene trees taking the species tree into account
Hi Andreas,
Sorry for the late answer. I think it is a great idea to do the
packaging inside the Debian Med team. I will create an account at
alioth.debian.org during the next days.
Cheers,
Erik
On Thu, Dec 6, 2012 at 4:16 PM, Andreas Tille <andreas@an3as.eu> wrote:
> Hi Erik,
>
> could you please confirm that you are interested in finding a sponsor
> for your work? As I said the Debian Med team is really interested. In
> case you have some time constraints or whatever I'd volunteer to commit
> your work to our Vcs (please specify whether you prefer Git or SVN) and
> will check whether it is ready for upload.
>
> Kind regards and thanks so far for your work
>
> Andreas.
>
> On Thu, Nov 29, 2012 at 09:31:45AM +0100, Andreas Tille wrote:
>> Hi Erik,
>>
>> it seems I missed your ITP - otherwise I would have most probably pinged
>> you whether you intent to do the packaging inside the Debian Med team. We
>> try to inject medical and microbiological software into Debian and your
>> ITP seems to fit perfectly into our biology task[1].
>>
>> So I would suggest you join the Debian Med team (I checked whether you
>> just have an account on alioth.debian.org but failed in searching for
>> your name - otherwise I would have added you to the team right now). All
>> steps are described in our team policy[2].
>>
>> Meanwhile I might check your packaging you provided at mentors however,
>> I would strongly recommend (you might need require) that you choose at
>> your preference either our SVN or Git repository (see [2]) for your
>> packaging work to enable effective team maintenance. For instance I
>> would turn your citation of the scientific paper into a debian/upstream
>> reference which is way more flexible than simply putting it into the
>> long description (which is deprecated).
>>
>> I hope you like this idea and we would be very happy to welcome you in
>> our team.
>>
>> Kind regards
>>
>> Andreas.
>>
>> [1] http://debian-med.alioth.debian.org/tasks/bio
>> [2] http://debian-med.alioth.debian.org/docs/policy.html
>>
>> > Package: wnpp
>> > Severity: wishlist
>> > Owner: Erik Sjölund <erik.sjolund@gmail.com>
>> >
>> > * Package name : prime-phylo
>> > Version : 1.0.3
>> > Upstream Author : Lars Arvestad<arve@csc.kth.se>, Bengt
>> > Sennblad<bengt.sennblad@ki.se> and others
>> > * URL : http://prime.sbc.su.se
>> > * License : GPL-3
>> > Programming Lang: C++
>> > Description: Bayesian estimation of gene trees taking the species
>> > tree into account
>> >
>> > PrIME (Probabilistic Integrated Models of Evolution) is a package
>> > supporting inference of evolutionary parameters in a Bayesian framework
>> > using MCMC. A distinguishing feature of PrIME is that the species tree is
>> > taken into account when analyzing gene trees.
>>
>> --
>> http://fam-tille.de
>>
>>
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>>
>>
>
> --
> http://fam-tille.de
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