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Bug#680106: marked as done (ITP: profisis -- Protein binding sites prediction (ISIS))

Your message dated Tue, 14 Aug 2012 23:00:15 +0000
with message-id <E1T1Q5v-0005Yo-65@franck.debian.org>
and subject line Bug#680106: fixed in profisis 1.0.11-1
has caused the Debian Bug report #680106,
regarding ITP: profisis -- Protein binding sites prediction (ISIS)
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
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-- 
680106: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=680106
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist
Owner: cedric@gmx.ca


* Package name    : profisis
  Version         : 1.0.5
  Upstream Author : 
* URL             : http://www.predictprotein.org/
* License         : GPL
  Programming Lang: Perl
  Description     : Protein binding sites prediction (ISIS)

Protein-protein interaction sites identified from sequence profisis (ISIS) is a machine learning-based method that identifies interacting residues from sequence alone. Although the method is developed using transient protein-protein interfaces from complexes of experimentally known 3D structures, it never explicitly uses 3D information. Instead, we combine predicted structural features with evolutionary information. The strongest predictions of the method reached over 90% accuracy in a cross-validation experiment. Our results suggest that despite the significant diversity in the nature of protein-protein interactions, they all share common basic principles and that these principles are identifiable from sequence alone.

--- End Message ---
--- Begin Message --- 
Source: profisis
Source-Version: 1.0.11-1

We believe that the bug you reported is fixed in the latest version of
profisis, which is due to be installed in the Debian FTP archive.

A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 680106@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Cedric Staniewski <cedric@gmx.ca> (supplier of updated profisis package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1

Format: 1.8
Date: Mon, 09 Jul 2012 20:22:37 +0200
Source: profisis
Binary: profisis
Architecture: source all
Version: 1.0.11-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Cedric Staniewski <cedric@gmx.ca>
Description: 
 profisis   - prediction of protein-protein interaction sites from sequence
Closes: 680106
Changes: 
 profisis (1.0.11-1) unstable; urgency=low
 .
   * Initial release (Closes: #680106)
 .
   [Laszlo Kajan <lkajan@rostlab.org>]
   * Fixed URL in d/control.
   * Put a note about pp-popularity-contest (nagging) in d/README.Debian.
   * Added copyright and license of examples/3A1P_A.rdbProf to d/copyright.
Checksums-Sha1: 
 c102ece06181611faefb0f6eb46f604b2ba6ba6b 1358 profisis_1.0.11-1.dsc
 e58e29054bcd664f2540b88092eb3f546952485c 142999 profisis_1.0.11.orig.tar.gz
 8de73f67b754b7f67750ec4d61d0d8b447be0b3d 2994 profisis_1.0.11-1.debian.tar.gz
 7e2d276b3dad52d904e3ca27124212e13febca40 76166 profisis_1.0.11-1_all.deb
Checksums-Sha256: 
 c526be3979f0b2fdf9bc49347489459a07ed14f6b212ec366d683476e953a715 1358 profisis_1.0.11-1.dsc
 9a0910db731713a5817a834b0f5bbdb6b3ae23089addc047d7b4909f506dfeb2 142999 profisis_1.0.11.orig.tar.gz
 c3a91dcc9ff9924ef78c99d7c19d7c6e6e47d53e4ccdbb533ecfdb42dc47a39a 2994 profisis_1.0.11-1.debian.tar.gz
 4d399cf1dd893f6f107ef4ebc9fb197805aab2d5d54d86bd9df96b88928f635f 76166 profisis_1.0.11-1_all.deb
Files: 
 ceb3937b86aef58fc3b274798a1c7326 1358 science extra profisis_1.0.11-1.dsc
 1890cc0d5f59d13551da83d2d7d23799 142999 science extra profisis_1.0.11.orig.tar.gz
 da2d47f6b992ba96dbb36153696f7bf4 2994 science extra profisis_1.0.11-1.debian.tar.gz
 b5f5950a103670b0c296ae14c8919dae 76166 science extra profisis_1.0.11-1_all.deb

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