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Bug#674265: marked as done (ITP: biojava3 -- Java API to develop tools for bioinformatics research rewrote from biojava1)

Your message dated Sat, 02 Jun 2012 11:47:10 +0000
with message-id <E1SamnW-0004ta-3H@franck.debian.org>
and subject line Bug#674265: fixed in biojava3-live 3.0.4-1
has caused the Debian Bug report #674265,
regarding ITP: biojava3 -- Java API to develop tools for bioinformatics research rewrote from biojava1
to be marked as done.

This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.

(NB: If you are a system administrator and have no idea what this
message is talking about, this may indicate a serious mail system
misconfiguration somewhere. Please contact owner@bugs.debian.org
immediately.)


-- 
674265: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=674265
Debian Bug Tracking System
Contact owner@bugs.debian.org with problems
--- Begin Message --- 
Package: wnpp
Severity: wishlist
Owner: Olivier Sallou <osallou@debian.org>


* Package name    : biojava3
  Version         : 3.0.4
  Upstream Author : BioJava team
* URL             : http://www.biojava.org/
* License         : LGPL
  Programming Lang: Java
  Description     : Java API to develop tools for bioinformatics research rewrote from biojava1

 BioJava is an open-source project dedicated to providing a Java framework
 for processing biological data. It includes objects for manipulating
 sequences, file parsers, DAS client and server support, access to BioSQL
 and Ensembl databases, and powerful analysis and statistical routines
 including a dynamic programming toolkit.
 .
 BioJava is provided by a vibrant community which meets annually at
 the Bioinformatics Open Source Conference (BOSC) that traditionally
 accompanies the Intelligent Systems in Molecular Biology (ISMB)
 meeting. Much like BioPerl, the employment of this library is valuable
 for everybody active in the field because of the many tricks of the
 trade one learns just by communicating on the mailing list.

--- End Message ---
--- Begin Message --- 
Source: biojava3-live
Source-Version: 3.0.4-1

We believe that the bug you reported is fixed in the latest version of
biojava3-live, which is due to be installed in the Debian FTP archive:

biojava3-live_3.0.4-1.debian.tar.gz
  to main/b/biojava3-live/biojava3-live_3.0.4-1.debian.tar.gz
biojava3-live_3.0.4-1.dsc
  to main/b/biojava3-live/biojava3-live_3.0.4-1.dsc
biojava3-live_3.0.4.orig.tar.bz2
  to main/b/biojava3-live/biojava3-live_3.0.4.orig.tar.bz2
libbiojava3-java-doc_3.0.4-1_all.deb
  to main/b/biojava3-live/libbiojava3-java-doc_3.0.4-1_all.deb
libbiojava3-java_3.0.4-1_all.deb
  to main/b/biojava3-live/libbiojava3-java_3.0.4-1_all.deb
libbiojava3.0-java_3.0.4-1_all.deb
  to main/b/biojava3-live/libbiojava3.0-java_3.0.4-1_all.deb



A summary of the changes between this version and the previous one is
attached.

Thank you for reporting the bug, which will now be closed.  If you
have further comments please address them to 674265@bugs.debian.org,
and the maintainer will reopen the bug report if appropriate.

Debian distribution maintenance software
pp.
Olivier Sallou <osallou@debian.org> (supplier of updated biojava3-live package)

(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing ftpmaster@debian.org)


-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA256

Format: 1.8
Date: Wed, 23 May 2012 18:13:46 +0200
Source: biojava3-live
Binary: libbiojava3.0-java libbiojava3-java libbiojava3-java-doc
Architecture: source all
Version: 3.0.4-1
Distribution: unstable
Urgency: low
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Changed-By: Olivier Sallou <osallou@debian.org>
Description: 
 libbiojava3-java - Java API to biological data and applications (default version)
 libbiojava3-java-doc - [Biology] Documentation for BioJava
 libbiojava3.0-java - Java API to biological data and applications (version 3)
Closes: 674265
Changes: 
 biojava3-live (3.0.4-1) unstable; urgency=low
 .
   * Initial release (Closes: #674265)
Checksums-Sha1: 
 2ddee597f72989c984c41874dfabfa23dbb62cca 2478 biojava3-live_3.0.4-1.dsc
 9583a61c22829e632ee322941f518f8192952de4 6174280 biojava3-live_3.0.4.orig.tar.bz2
 b18394232c6916125afa43c8e7227c2bf6ede32e 7754 biojava3-live_3.0.4-1.debian.tar.gz
 d529f657c4cfb6529edfcd14e49e844eb6dda763 3121448 libbiojava3.0-java_3.0.4-1_all.deb
 c73ab0ede2f70f3b6aaa655b43b1ad3bafdd705c 2742 libbiojava3-java_3.0.4-1_all.deb
 ee46b67df18f37ba08206539931d1d3d643e21ba 2161198 libbiojava3-java-doc_3.0.4-1_all.deb
Checksums-Sha256: 
 270f3554805fdb35cd6bb4cc4bedb08530cf50ccb05bf41049dc226945f7a67d 2478 biojava3-live_3.0.4-1.dsc
 69ed4e0c98a582e5308da73806c853f4d1d2cf02bc5b8534731de244251611bd 6174280 biojava3-live_3.0.4.orig.tar.bz2
 6b932fa3221175caa0d033900e0c92e823014af9d587f087964e0f238720c912 7754 biojava3-live_3.0.4-1.debian.tar.gz
 0474a3f1cdfde71dd170e162e8d7f145b107e094826eb89ef164a2037d2dff38 3121448 libbiojava3.0-java_3.0.4-1_all.deb
 eb53ff788b78bc651e35a2c0f7bab6e23350359b8810c9f06e283860e6248e7b 2742 libbiojava3-java_3.0.4-1_all.deb
 5fdbea7af7fffea30c8575a91466ede3ee5bb2a1e670fc6db56404c3619c3d25 2161198 libbiojava3-java-doc_3.0.4-1_all.deb
Files: 
 79c652b53f9d0881bb56ee9d670716f8 2478 java optional biojava3-live_3.0.4-1.dsc
 6da41c8dac1cb7527c78dc3a7a0d34d6 6174280 java optional biojava3-live_3.0.4.orig.tar.bz2
 27b18dd881fbf9d9f42fa3de0ab4759a 7754 java optional biojava3-live_3.0.4-1.debian.tar.gz
 57aab979b5430cc3229e22c3a6c47ecb 3121448 java optional libbiojava3.0-java_3.0.4-1_all.deb
 08ba4eb5dc517de5c4ecbf9ff6895ef9 2742 java optional libbiojava3-java_3.0.4-1_all.deb
 ea85c32dd72fcd6510efa3009f8510f5 2161198 doc optional libbiojava3-java-doc_3.0.4-1_all.deb

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--- End Message ---
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